Protein–RNA interactions for Protein: Q8CA09

Gm4894, Predicted gene 4894, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4894Q8CA09 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm4894Q8CA09 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.16■□□□□ 0.82
Gm4894Q8CA09 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm4894Q8CA09 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm4894Q8CA09 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm4894Q8CA09 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm4894Q8CA09 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Gm4894Q8CA09 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Gm4894Q8CA09 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
Gm4894Q8CA09 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.13■□□□□ 0.81
Gm4894Q8CA09 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
Gm4894Q8CA09 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm4894Q8CA09 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm4894Q8CA09 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm4894Q8CA09 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Gm4894Q8CA09 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.1■□□□□ 0.81
Gm4894Q8CA09 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Gm4894Q8CA09 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm4894Q8CA09 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Gm4894Q8CA09 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm4894Q8CA09 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gm4894Q8CA09 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Gm4894Q8CA09 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Gm4894Q8CA09 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm4894Q8CA09 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm4894Q8CA09 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.06■□□□□ 0.8
Gm4894Q8CA09 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm4894Q8CA09 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm4894Q8CA09 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm4894Q8CA09 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4894Q8CA09 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4894Q8CA09 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4894Q8CA09 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm4894Q8CA09 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm4894Q8CA09 Amer2-203ENSMUST00000225247 2662 ntBASIC20.01■□□□□ 0.79
Gm4894Q8CA09 Gm30346-201ENSMUST00000218641 1699 ntBASIC20■□□□□ 0.79
Gm4894Q8CA09 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm4894Q8CA09 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Gm4894Q8CA09 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm4894Q8CA09 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm4894Q8CA09 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm4894Q8CA09 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.98■□□□□ 0.79
Gm4894Q8CA09 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm4894Q8CA09 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm4894Q8CA09 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm4894Q8CA09 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm4894Q8CA09 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm4894Q8CA09 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm4894Q8CA09 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.95■□□□□ 0.78
Gm4894Q8CA09 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Gm4894Q8CA09 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Gm4894Q8CA09 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.94■□□□□ 0.78
Gm4894Q8CA09 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm4894Q8CA09 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gm4894Q8CA09 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm4894Q8CA09 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Gm4894Q8CA09 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gm4894Q8CA09 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm4894Q8CA09 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.92■□□□□ 0.78
Gm4894Q8CA09 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm4894Q8CA09 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gm4894Q8CA09 Peli2-204ENSMUST00000226513 1320 ntBASIC19.9■□□□□ 0.78
Gm4894Q8CA09 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm4894Q8CA09 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm4894Q8CA09 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
Gm4894Q8CA09 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm4894Q8CA09 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Gm4894Q8CA09 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm4894Q8CA09 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm4894Q8CA09 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm4894Q8CA09 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm4894Q8CA09 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.86■□□□□ 0.77
Gm4894Q8CA09 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm4894Q8CA09 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm4894Q8CA09 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm4894Q8CA09 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm4894Q8CA09 Gm26115-201ENSMUST00000175605 87 ntBASIC19.85■□□□□ 0.77
Gm4894Q8CA09 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.85■□□□□ 0.77
Gm4894Q8CA09 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm4894Q8CA09 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Gm4894Q8CA09 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.84■□□□□ 0.77
Gm4894Q8CA09 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm4894Q8CA09 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm4894Q8CA09 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm4894Q8CA09 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Gm4894Q8CA09 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Gm4894Q8CA09 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Gm4894Q8CA09 Gm8109-201ENSMUST00000194076 746 ntBASIC19.81■□□□□ 0.76
Gm4894Q8CA09 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm4894Q8CA09 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm4894Q8CA09 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm4894Q8CA09 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm4894Q8CA09 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Gm4894Q8CA09 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm4894Q8CA09 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Gm4894Q8CA09 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm4894Q8CA09 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm4894Q8CA09 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm4894Q8CA09 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.78■□□□□ 0.76
Gm4894Q8CA09 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms