Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Tsen54Q8C2A2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tsen54Q8C2A2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Tsen54Q8C2A2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.87■□□□□ 0.93
Tsen54Q8C2A2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tsen54Q8C2A2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Tsen54Q8C2A2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Tsen54Q8C2A2 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.86■□□□□ 0.93
Tsen54Q8C2A2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tsen54Q8C2A2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tsen54Q8C2A2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.83■□□□□ 0.92
Tsen54Q8C2A2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tsen54Q8C2A2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tsen54Q8C2A2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tsen54Q8C2A2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tsen54Q8C2A2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.81■□□□□ 0.92
Tsen54Q8C2A2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tsen54Q8C2A2 Gm8109-201ENSMUST00000194076 746 ntBASIC20.81■□□□□ 0.92
Tsen54Q8C2A2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Tsen54Q8C2A2 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.79■□□□□ 0.92
Tsen54Q8C2A2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Tsen54Q8C2A2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tsen54Q8C2A2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tsen54Q8C2A2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tsen54Q8C2A2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Tsen54Q8C2A2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Tsen54Q8C2A2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tsen54Q8C2A2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tsen54Q8C2A2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tsen54Q8C2A2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tsen54Q8C2A2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tsen54Q8C2A2 Gm27322-201ENSMUST00000184007 104 ntBASIC20.72■□□□□ 0.91
Tsen54Q8C2A2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Tsen54Q8C2A2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tsen54Q8C2A2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tsen54Q8C2A2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Tsen54Q8C2A2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Tsen54Q8C2A2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tsen54Q8C2A2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tsen54Q8C2A2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tsen54Q8C2A2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tsen54Q8C2A2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tsen54Q8C2A2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.69■□□□□ 0.9
Tsen54Q8C2A2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tsen54Q8C2A2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.67■□□□□ 0.9
Tsen54Q8C2A2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tsen54Q8C2A2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Tsen54Q8C2A2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tsen54Q8C2A2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tsen54Q8C2A2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tsen54Q8C2A2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.63■□□□□ 0.89
Tsen54Q8C2A2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tsen54Q8C2A2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tsen54Q8C2A2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tsen54Q8C2A2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.61■□□□□ 0.89
Tsen54Q8C2A2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tsen54Q8C2A2 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.61■□□□□ 0.89
Tsen54Q8C2A2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tsen54Q8C2A2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tsen54Q8C2A2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tsen54Q8C2A2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tsen54Q8C2A2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tsen54Q8C2A2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tsen54Q8C2A2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tsen54Q8C2A2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.56■□□□□ 0.88
Tsen54Q8C2A2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tsen54Q8C2A2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tsen54Q8C2A2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tsen54Q8C2A2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tsen54Q8C2A2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tsen54Q8C2A2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tsen54Q8C2A2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tsen54Q8C2A2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tsen54Q8C2A2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tsen54Q8C2A2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Tsen54Q8C2A2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tsen54Q8C2A2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tsen54Q8C2A2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tsen54Q8C2A2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Tsen54Q8C2A2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tsen54Q8C2A2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tsen54Q8C2A2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tsen54Q8C2A2 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.44■□□□□ 0.86
Tsen54Q8C2A2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tsen54Q8C2A2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tsen54Q8C2A2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tsen54Q8C2A2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.43■□□□□ 0.86
Tsen54Q8C2A2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tsen54Q8C2A2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tsen54Q8C2A2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tsen54Q8C2A2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tsen54Q8C2A2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Tsen54Q8C2A2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.41■□□□□ 0.86
Tsen54Q8C2A2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tsen54Q8C2A2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tsen54Q8C2A2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tsen54Q8C2A2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tsen54Q8C2A2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Tsen54Q8C2A2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tsen54Q8C2A2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms