Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC36,02■■■■□ 3,36
Cps1Q8C196 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC36,02■■■■□ 3,36
Cps1Q8C196 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC36,01■■■■□ 3,35
Cps1Q8C196 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC36■■■■□ 3,35
Cps1Q8C196 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC36■■■■□ 3,35
Cps1Q8C196 Gm5987-201ENSMUST00000196433 1151 ntBASIC35,99■■■■□ 3,35
Cps1Q8C196 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC35,99■■■■□ 3,35
Cps1Q8C196 Gm8503-201ENSMUST00000118131 455 ntBASIC35,97■■■■□ 3,35
Cps1Q8C196 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC35,96■■■■□ 3,35
Cps1Q8C196 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC35,94■■■■□ 3,34
Cps1Q8C196 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC35,93■■■■□ 3,34
Cps1Q8C196 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC35,93■■■■□ 3,34
Cps1Q8C196 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC35,92■■■■□ 3,34
Cps1Q8C196 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC35,91■■■■□ 3,34
Cps1Q8C196 Gm9939-201ENSMUST00000067161 1154 ntBASIC35,91■■■■□ 3,34
Cps1Q8C196 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC35,88■■■■□ 3,33
Cps1Q8C196 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC35,87■■■■□ 3,33
Cps1Q8C196 Gm43863-201ENSMUST00000203822 1192 ntBASIC35,87■■■■□ 3,33
Cps1Q8C196 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC35,86■■■■□ 3,33
Cps1Q8C196 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC35,85■■■■□ 3,33
Cps1Q8C196 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC35,85■■■■□ 3,33
Cps1Q8C196 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC35,85■■■■□ 3,33
Cps1Q8C196 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC35,84■■■■□ 3,33
Cps1Q8C196 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC35,82■■■■□ 3,32
Cps1Q8C196 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC35,81■■■■□ 3,32
Cps1Q8C196 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC35,79■■■■□ 3,32
Cps1Q8C196 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC35,78■■■■□ 3,32
Cps1Q8C196 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC35,77■■■■□ 3,32
Cps1Q8C196 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC35,76■■■■□ 3,31
Cps1Q8C196 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC35,76■■■■□ 3,31
Cps1Q8C196 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC35,73■■■■□ 3,31
Cps1Q8C196 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC35,73■■■■□ 3,31
Cps1Q8C196 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC35,71■■■■□ 3,31
Cps1Q8C196 Gm6821-201ENSMUST00000107540 542 ntBASIC35,7■■■■□ 3,31
Cps1Q8C196 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC35,69■■■■□ 3,3
Cps1Q8C196 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC35,69■■■■□ 3,3
Cps1Q8C196 AC157572.2-201ENSMUST00000226970 908 ntBASIC35,68■■■■□ 3,3
Cps1Q8C196 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC35,68■■■■□ 3,3
Cps1Q8C196 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC35,66■■■■□ 3,3
Cps1Q8C196 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC35,66■■■■□ 3,3
Cps1Q8C196 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC35,64■■■■□ 3,3
Cps1Q8C196 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC35,64■■■■□ 3,3
Cps1Q8C196 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC35,64■■■■□ 3,3
Cps1Q8C196 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC35,64■■■■□ 3,3
Cps1Q8C196 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC35,62■■■■□ 3,29
Cps1Q8C196 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC35,6■■■■□ 3,29
Cps1Q8C196 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC35,59■■■■□ 3,29
Cps1Q8C196 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC35,58■■■■□ 3,29
Cps1Q8C196 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC35,58■■■■□ 3,29
Cps1Q8C196 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC35,58■■■■□ 3,29
Cps1Q8C196 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC35,57■■■■□ 3,28
Cps1Q8C196 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC35,56■■■■□ 3,28
Cps1Q8C196 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC35,55■■■■□ 3,28
Cps1Q8C196 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC35,54■■■■□ 3,28
Cps1Q8C196 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC35,53■■■■□ 3,28
Cps1Q8C196 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC35,52■■■■□ 3,28
Cps1Q8C196 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC35,51■■■■□ 3,27
Cps1Q8C196 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC35,5■■■■□ 3,27
Cps1Q8C196 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC35,48■■■■□ 3,27
Cps1Q8C196 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC35,48■■■■□ 3,27
Cps1Q8C196 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC35,48■■■■□ 3,27
Cps1Q8C196 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC35,47■■■■□ 3,27
Cps1Q8C196 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC35,47■■■■□ 3,27
Cps1Q8C196 Gm42809-201ENSMUST00000198429 1138 ntBASIC35,46■■■■□ 3,27
Cps1Q8C196 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC35,45■■■■□ 3,27
Cps1Q8C196 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC35,43■■■■□ 3,26
Cps1Q8C196 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC35,42■■■■□ 3,26
Cps1Q8C196 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC35,42■■■■□ 3,26
Cps1Q8C196 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC35,39■■■■□ 3,26
Cps1Q8C196 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC35,38■■■■□ 3,25
Cps1Q8C196 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC35,38■■■■□ 3,25
Cps1Q8C196 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC35,37■■■■□ 3,25
Cps1Q8C196 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC35,37■■■■□ 3,25
Cps1Q8C196 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC35,34■■■■□ 3,25
Cps1Q8C196 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC35,34■■■■□ 3,25
Cps1Q8C196 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC35,32■■■■□ 3,24
Cps1Q8C196 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC35,31■■■■□ 3,24
Cps1Q8C196 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC35,28■■■■□ 3,24
Cps1Q8C196 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC35,27■■■■□ 3,24
Cps1Q8C196 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC35,26■■■■□ 3,23
Cps1Q8C196 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35,25■■■■□ 3,23
Cps1Q8C196 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC35,24■■■■□ 3,23
Cps1Q8C196 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC35,23■■■■□ 3,23
Cps1Q8C196 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC35,23■■■■□ 3,23
Cps1Q8C196 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC35,23■■■■□ 3,23
Cps1Q8C196 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC35,22■■■■□ 3,23
Cps1Q8C196 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC35,22■■■■□ 3,23
Cps1Q8C196 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC35,2■■■■□ 3,23
Cps1Q8C196 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC35,18■■■■□ 3,22
Cps1Q8C196 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC35,18■■■■□ 3,22
Cps1Q8C196 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC35,18■■■■□ 3,22
Cps1Q8C196 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC35,18■■■■□ 3,22
Cps1Q8C196 Gm30346-201ENSMUST00000218641 1699 ntBASIC35,17■■■■□ 3,22
Cps1Q8C196 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC35,17■■■■□ 3,22
Cps1Q8C196 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC35,17■■■■□ 3,22
Cps1Q8C196 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC35,15■■■■□ 3,22
Cps1Q8C196 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC35,14■■■■□ 3,22
Cps1Q8C196 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC35,13■■■■□ 3,21
Cps1Q8C196 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC35,13■■■■□ 3,21
Cps1Q8C196 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC35,13■■■■□ 3,21
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms