Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ppp4r4Q8C0Y0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ppp4r4Q8C0Y0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ppp4r4Q8C0Y0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Ppp4r4Q8C0Y0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
Ppp4r4Q8C0Y0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.3■■□□□ 1.64
Ppp4r4Q8C0Y0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ppp4r4Q8C0Y0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.29■■□□□ 1.64
Ppp4r4Q8C0Y0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Ppp4r4Q8C0Y0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ppp4r4Q8C0Y0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ppp4r4Q8C0Y0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Ppp4r4Q8C0Y0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ppp4r4Q8C0Y0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ppp4r4Q8C0Y0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.25■■□□□ 1.63
Ppp4r4Q8C0Y0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Ppp4r4Q8C0Y0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.25■■□□□ 1.63
Ppp4r4Q8C0Y0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ppp4r4Q8C0Y0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.24■■□□□ 1.63
Ppp4r4Q8C0Y0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.24■■□□□ 1.63
Ppp4r4Q8C0Y0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ppp4r4Q8C0Y0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.23■■□□□ 1.63
Ppp4r4Q8C0Y0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.23■■□□□ 1.63
Ppp4r4Q8C0Y0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.21■■□□□ 1.63
Ppp4r4Q8C0Y0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
Ppp4r4Q8C0Y0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Ppp4r4Q8C0Y0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ppp4r4Q8C0Y0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ppp4r4Q8C0Y0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ppp4r4Q8C0Y0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ppp4r4Q8C0Y0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ppp4r4Q8C0Y0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.18■■□□□ 1.62
Ppp4r4Q8C0Y0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ppp4r4Q8C0Y0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Ppp4r4Q8C0Y0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ppp4r4Q8C0Y0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Ppp4r4Q8C0Y0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Ppp4r4Q8C0Y0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ppp4r4Q8C0Y0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ppp4r4Q8C0Y0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ppp4r4Q8C0Y0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Ppp4r4Q8C0Y0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
Ppp4r4Q8C0Y0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.1■■□□□ 1.61
Ppp4r4Q8C0Y0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ppp4r4Q8C0Y0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Ppp4r4Q8C0Y0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.09■■□□□ 1.61
Ppp4r4Q8C0Y0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ppp4r4Q8C0Y0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ppp4r4Q8C0Y0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ppp4r4Q8C0Y0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ppp4r4Q8C0Y0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ppp4r4Q8C0Y0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.05■■□□□ 1.6
Ppp4r4Q8C0Y0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ppp4r4Q8C0Y0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Ppp4r4Q8C0Y0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ppp4r4Q8C0Y0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ppp4r4Q8C0Y0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ppp4r4Q8C0Y0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Ppp4r4Q8C0Y0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ppp4r4Q8C0Y0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ppp4r4Q8C0Y0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ppp4r4Q8C0Y0 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.96■■□□□ 1.59
Ppp4r4Q8C0Y0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Ppp4r4Q8C0Y0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.95■■□□□ 1.58
Ppp4r4Q8C0Y0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ppp4r4Q8C0Y0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ppp4r4Q8C0Y0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ppp4r4Q8C0Y0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ppp4r4Q8C0Y0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ppp4r4Q8C0Y0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Ppp4r4Q8C0Y0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ppp4r4Q8C0Y0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ppp4r4Q8C0Y0 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.93■■□□□ 1.58
Ppp4r4Q8C0Y0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ppp4r4Q8C0Y0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Ppp4r4Q8C0Y0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ppp4r4Q8C0Y0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.91■■□□□ 1.58
Ppp4r4Q8C0Y0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Ppp4r4Q8C0Y0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ppp4r4Q8C0Y0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ppp4r4Q8C0Y0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ppp4r4Q8C0Y0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ppp4r4Q8C0Y0 Gm45855-201ENSMUST00000212546 880 ntBASIC24.87■■□□□ 1.57
Ppp4r4Q8C0Y0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.86■■□□□ 1.57
Ppp4r4Q8C0Y0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ppp4r4Q8C0Y0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ppp4r4Q8C0Y0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ppp4r4Q8C0Y0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ppp4r4Q8C0Y0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Ppp4r4Q8C0Y0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ppp4r4Q8C0Y0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.82■■□□□ 1.56
Ppp4r4Q8C0Y0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ppp4r4Q8C0Y0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ppp4r4Q8C0Y0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
Ppp4r4Q8C0Y0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.79■■□□□ 1.56
Ppp4r4Q8C0Y0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.78■■□□□ 1.56
Ppp4r4Q8C0Y0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ppp4r4Q8C0Y0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
Ppp4r4Q8C0Y0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.75■■□□□ 1.55
Ppp4r4Q8C0Y0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms