Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Nek11Q8C0Q4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Nek11Q8C0Q4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Nek11Q8C0Q4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Nek11Q8C0Q4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Nek11Q8C0Q4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Nek11Q8C0Q4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.47■■■□□ 2.47
Nek11Q8C0Q4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
Nek11Q8C0Q4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
Nek11Q8C0Q4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Nek11Q8C0Q4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Nek11Q8C0Q4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.44■■■□□ 2.46
Nek11Q8C0Q4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Nek11Q8C0Q4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.41■■■□□ 2.46
Nek11Q8C0Q4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Nek11Q8C0Q4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
Nek11Q8C0Q4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Nek11Q8C0Q4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Nek11Q8C0Q4 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.37■■■□□ 2.45
Nek11Q8C0Q4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Nek11Q8C0Q4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Nek11Q8C0Q4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Nek11Q8C0Q4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Nek11Q8C0Q4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Nek11Q8C0Q4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
Nek11Q8C0Q4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Nek11Q8C0Q4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Nek11Q8C0Q4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.28■■■□□ 2.44
Nek11Q8C0Q4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Nek11Q8C0Q4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Nek11Q8C0Q4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Nek11Q8C0Q4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Nek11Q8C0Q4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.26■■■□□ 2.43
Nek11Q8C0Q4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Nek11Q8C0Q4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Nek11Q8C0Q4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Nek11Q8C0Q4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Nek11Q8C0Q4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Nek11Q8C0Q4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Nek11Q8C0Q4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Nek11Q8C0Q4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Nek11Q8C0Q4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Nek11Q8C0Q4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Nek11Q8C0Q4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
Nek11Q8C0Q4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Nek11Q8C0Q4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Nek11Q8C0Q4 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.16■■■□□ 2.42
Nek11Q8C0Q4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
Nek11Q8C0Q4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
Nek11Q8C0Q4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Nek11Q8C0Q4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.14■■■□□ 2.42
Nek11Q8C0Q4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
Nek11Q8C0Q4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.14■■■□□ 2.42
Nek11Q8C0Q4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Nek11Q8C0Q4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
Nek11Q8C0Q4 Zfp131-205ENSMUST00000223812 663 ntBASIC30.12■■■□□ 2.41
Nek11Q8C0Q4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Nek11Q8C0Q4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Nek11Q8C0Q4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Nek11Q8C0Q4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
Nek11Q8C0Q4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Nek11Q8C0Q4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.05■■■□□ 2.4
Nek11Q8C0Q4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Nek11Q8C0Q4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Nek11Q8C0Q4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Nek11Q8C0Q4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Nek11Q8C0Q4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Nek11Q8C0Q4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Nek11Q8C0Q4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30■■■□□ 2.39
Nek11Q8C0Q4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Nek11Q8C0Q4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Nek11Q8C0Q4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
Nek11Q8C0Q4 Zxda-201ENSMUST00000117281 2621 ntBASIC29.97■■■□□ 2.39
Nek11Q8C0Q4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
Nek11Q8C0Q4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Nek11Q8C0Q4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Nek11Q8C0Q4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Nek11Q8C0Q4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.94■■■□□ 2.38
Nek11Q8C0Q4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Nek11Q8C0Q4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.93■■■□□ 2.38
Nek11Q8C0Q4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Nek11Q8C0Q4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Nek11Q8C0Q4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Nek11Q8C0Q4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.89■■■□□ 2.38
Nek11Q8C0Q4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Nek11Q8C0Q4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Nek11Q8C0Q4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Nek11Q8C0Q4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Nek11Q8C0Q4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Nek11Q8C0Q4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.85■■■□□ 2.37
Nek11Q8C0Q4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Nek11Q8C0Q4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
Nek11Q8C0Q4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Nek11Q8C0Q4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Nek11Q8C0Q4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Nek11Q8C0Q4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Nek11Q8C0Q4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
Nek11Q8C0Q4 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.8■■■□□ 2.36
Nek11Q8C0Q4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Nek11Q8C0Q4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms