Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.47■■□□□ 1.03
Lsm11Q8BUV6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Lsm11Q8BUV6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm11Q8BUV6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm11Q8BUV6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm11Q8BUV6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm11Q8BUV6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm11Q8BUV6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.41■■□□□ 1.02
Lsm11Q8BUV6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Lsm11Q8BUV6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm11Q8BUV6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm11Q8BUV6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm11Q8BUV6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm11Q8BUV6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm11Q8BUV6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.39■■□□□ 1.01
Lsm11Q8BUV6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Lsm11Q8BUV6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Lsm11Q8BUV6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Lsm11Q8BUV6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lsm11Q8BUV6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Lsm11Q8BUV6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.37■■□□□ 1.01
Lsm11Q8BUV6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.36■■□□□ 1.01
Lsm11Q8BUV6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.36■■□□□ 1.01
Lsm11Q8BUV6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lsm11Q8BUV6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsm11Q8BUV6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Lsm11Q8BUV6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lsm11Q8BUV6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.34■■□□□ 1.01
Lsm11Q8BUV6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.34■■□□□ 1.01
Lsm11Q8BUV6 Gm25262-201ENSMUST00000174934 133 ntBASIC21.33■■□□□ 1.01
Lsm11Q8BUV6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lsm11Q8BUV6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.33■■□□□ 1
Lsm11Q8BUV6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.33■■□□□ 1
Lsm11Q8BUV6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lsm11Q8BUV6 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.32■■□□□ 1
Lsm11Q8BUV6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Lsm11Q8BUV6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsm11Q8BUV6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsm11Q8BUV6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsm11Q8BUV6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lsm11Q8BUV6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lsm11Q8BUV6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.3■■□□□ 1
Lsm11Q8BUV6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Lsm11Q8BUV6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lsm11Q8BUV6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lsm11Q8BUV6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.27■■□□□ 1
Lsm11Q8BUV6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Lsm11Q8BUV6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lsm11Q8BUV6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Lsm11Q8BUV6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsm11Q8BUV6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsm11Q8BUV6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Lsm11Q8BUV6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsm11Q8BUV6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Lsm11Q8BUV6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.25■□□□□ 0.99
Lsm11Q8BUV6 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.25■□□□□ 0.99
Lsm11Q8BUV6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lsm11Q8BUV6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm11Q8BUV6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm11Q8BUV6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.23■□□□□ 0.99
Lsm11Q8BUV6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lsm11Q8BUV6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
Lsm11Q8BUV6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lsm11Q8BUV6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lsm11Q8BUV6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lsm11Q8BUV6 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.21■□□□□ 0.99
Lsm11Q8BUV6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm11Q8BUV6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.2■□□□□ 0.98
Lsm11Q8BUV6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm11Q8BUV6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm11Q8BUV6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm11Q8BUV6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Lsm11Q8BUV6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm11Q8BUV6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Lsm11Q8BUV6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm11Q8BUV6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm11Q8BUV6 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.16■□□□□ 0.98
Lsm11Q8BUV6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm11Q8BUV6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm11Q8BUV6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lsm11Q8BUV6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
Lsm11Q8BUV6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm11Q8BUV6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm11Q8BUV6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.12■□□□□ 0.97
Lsm11Q8BUV6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm11Q8BUV6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Lsm11Q8BUV6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm11Q8BUV6 Gm27322-201ENSMUST00000184007 104 ntBASIC21.09■□□□□ 0.97
Lsm11Q8BUV6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm11Q8BUV6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm11Q8BUV6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm11Q8BUV6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm11Q8BUV6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Lsm11Q8BUV6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm11Q8BUV6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm11Q8BUV6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.05■□□□□ 0.96
Lsm11Q8BUV6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.05■□□□□ 0.96
Lsm11Q8BUV6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm11Q8BUV6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm11Q8BUV6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms