Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.19■■□□□ 1.46
Cpne3Q8BT60 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cpne3Q8BT60 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.19■■□□□ 1.46
Cpne3Q8BT60 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cpne3Q8BT60 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.17■■□□□ 1.46
Cpne3Q8BT60 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cpne3Q8BT60 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cpne3Q8BT60 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.16■■□□□ 1.46
Cpne3Q8BT60 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cpne3Q8BT60 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.15■■□□□ 1.46
Cpne3Q8BT60 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.15■■□□□ 1.46
Cpne3Q8BT60 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.14■■□□□ 1.46
Cpne3Q8BT60 Peli2-204ENSMUST00000226513 1320 ntBASIC24.14■■□□□ 1.46
Cpne3Q8BT60 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
Cpne3Q8BT60 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Cpne3Q8BT60 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.13■■□□□ 1.45
Cpne3Q8BT60 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cpne3Q8BT60 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cpne3Q8BT60 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cpne3Q8BT60 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Cpne3Q8BT60 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cpne3Q8BT60 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Cpne3Q8BT60 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cpne3Q8BT60 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Cpne3Q8BT60 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
Cpne3Q8BT60 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Cpne3Q8BT60 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Cpne3Q8BT60 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cpne3Q8BT60 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cpne3Q8BT60 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Cpne3Q8BT60 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.05■■□□□ 1.44
Cpne3Q8BT60 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.05■■□□□ 1.44
Cpne3Q8BT60 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cpne3Q8BT60 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Cpne3Q8BT60 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.02■■□□□ 1.44
Cpne3Q8BT60 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cpne3Q8BT60 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cpne3Q8BT60 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24■■□□□ 1.43
Cpne3Q8BT60 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
Cpne3Q8BT60 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Cpne3Q8BT60 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Cpne3Q8BT60 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cpne3Q8BT60 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Cpne3Q8BT60 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cpne3Q8BT60 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Cpne3Q8BT60 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Cpne3Q8BT60 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.95■■□□□ 1.43
Cpne3Q8BT60 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Cpne3Q8BT60 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cpne3Q8BT60 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Cpne3Q8BT60 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cpne3Q8BT60 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cpne3Q8BT60 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cpne3Q8BT60 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cpne3Q8BT60 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cpne3Q8BT60 Gm24804-201ENSMUST00000174982 85 ntBASIC23.9■■□□□ 1.42
Cpne3Q8BT60 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Cpne3Q8BT60 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cpne3Q8BT60 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cpne3Q8BT60 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cpne3Q8BT60 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Cpne3Q8BT60 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cpne3Q8BT60 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Cpne3Q8BT60 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Cpne3Q8BT60 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cpne3Q8BT60 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Cpne3Q8BT60 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cpne3Q8BT60 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.85■■□□□ 1.41
Cpne3Q8BT60 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Cpne3Q8BT60 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cpne3Q8BT60 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Cpne3Q8BT60 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cpne3Q8BT60 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cpne3Q8BT60 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
Cpne3Q8BT60 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cpne3Q8BT60 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpne3Q8BT60 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
Cpne3Q8BT60 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpne3Q8BT60 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpne3Q8BT60 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cpne3Q8BT60 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cpne3Q8BT60 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cpne3Q8BT60 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Cpne3Q8BT60 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
Cpne3Q8BT60 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.79■■□□□ 1.4
Cpne3Q8BT60 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cpne3Q8BT60 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Cpne3Q8BT60 Amer2-203ENSMUST00000225247 2662 ntBASIC23.78■■□□□ 1.4
Cpne3Q8BT60 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.77■■□□□ 1.4
Cpne3Q8BT60 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cpne3Q8BT60 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cpne3Q8BT60 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.77■■□□□ 1.4
Cpne3Q8BT60 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cpne3Q8BT60 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Cpne3Q8BT60 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cpne3Q8BT60 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Cpne3Q8BT60 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Cpne3Q8BT60 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cpne3Q8BT60 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cpne3Q8BT60 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms