Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Sfr1Q8BP27 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Sfr1Q8BP27 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Sfr1Q8BP27 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.68■■□□□ 1.7
Sfr1Q8BP27 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Sfr1Q8BP27 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Sfr1Q8BP27 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Sfr1Q8BP27 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sfr1Q8BP27 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sfr1Q8BP27 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sfr1Q8BP27 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.64■■□□□ 1.7
Sfr1Q8BP27 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sfr1Q8BP27 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Sfr1Q8BP27 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Sfr1Q8BP27 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Sfr1Q8BP27 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.62■■□□□ 1.69
Sfr1Q8BP27 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
Sfr1Q8BP27 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sfr1Q8BP27 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Sfr1Q8BP27 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Sfr1Q8BP27 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.59■■□□□ 1.69
Sfr1Q8BP27 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Sfr1Q8BP27 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sfr1Q8BP27 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sfr1Q8BP27 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sfr1Q8BP27 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.56■■□□□ 1.68
Sfr1Q8BP27 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Sfr1Q8BP27 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Sfr1Q8BP27 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.54■■□□□ 1.68
Sfr1Q8BP27 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Sfr1Q8BP27 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Sfr1Q8BP27 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sfr1Q8BP27 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.51■■□□□ 1.67
Sfr1Q8BP27 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Sfr1Q8BP27 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.49■■□□□ 1.67
Sfr1Q8BP27 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sfr1Q8BP27 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sfr1Q8BP27 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Sfr1Q8BP27 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
Sfr1Q8BP27 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sfr1Q8BP27 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sfr1Q8BP27 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sfr1Q8BP27 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Sfr1Q8BP27 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.43■■□□□ 1.66
Sfr1Q8BP27 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Sfr1Q8BP27 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Sfr1Q8BP27 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Sfr1Q8BP27 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Sfr1Q8BP27 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Sfr1Q8BP27 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sfr1Q8BP27 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sfr1Q8BP27 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.37■■□□□ 1.65
Sfr1Q8BP27 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sfr1Q8BP27 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Sfr1Q8BP27 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sfr1Q8BP27 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sfr1Q8BP27 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.33■■□□□ 1.64
Sfr1Q8BP27 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
Sfr1Q8BP27 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sfr1Q8BP27 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Sfr1Q8BP27 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sfr1Q8BP27 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.29■■□□□ 1.64
Sfr1Q8BP27 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Sfr1Q8BP27 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Sfr1Q8BP27 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sfr1Q8BP27 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.27■■□□□ 1.64
Sfr1Q8BP27 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sfr1Q8BP27 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Sfr1Q8BP27 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.26■■□□□ 1.63
Sfr1Q8BP27 Gm9397-201ENSMUST00000200125 605 ntBASIC25.26■■□□□ 1.63
Sfr1Q8BP27 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Sfr1Q8BP27 Zxda-201ENSMUST00000117281 2621 ntBASIC25.25■■□□□ 1.63
Sfr1Q8BP27 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Sfr1Q8BP27 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.25■■□□□ 1.63
Sfr1Q8BP27 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sfr1Q8BP27 Gm45855-201ENSMUST00000212546 880 ntBASIC25.24■■□□□ 1.63
Sfr1Q8BP27 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Sfr1Q8BP27 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Sfr1Q8BP27 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Sfr1Q8BP27 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Sfr1Q8BP27 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Sfr1Q8BP27 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Sfr1Q8BP27 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
Sfr1Q8BP27 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.19■■□□□ 1.62
Sfr1Q8BP27 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Sfr1Q8BP27 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Sfr1Q8BP27 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Sfr1Q8BP27 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.17■■□□□ 1.62
Sfr1Q8BP27 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Sfr1Q8BP27 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Sfr1Q8BP27 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
Sfr1Q8BP27 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sfr1Q8BP27 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Sfr1Q8BP27 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Sfr1Q8BP27 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.14■■□□□ 1.62
Sfr1Q8BP27 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Sfr1Q8BP27 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sfr1Q8BP27 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sfr1Q8BP27 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sfr1Q8BP27 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms