Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdh20Q8BIZ0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
Pcdh20Q8BIZ0 Gm16148-201ENSMUST00000119653 893 ntBASIC24.39■■□□□ 1.49
Pcdh20Q8BIZ0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdh20Q8BIZ0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdh20Q8BIZ0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdh20Q8BIZ0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Pcdh20Q8BIZ0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdh20Q8BIZ0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdh20Q8BIZ0 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.36■■□□□ 1.49
Pcdh20Q8BIZ0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.36■■□□□ 1.49
Pcdh20Q8BIZ0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdh20Q8BIZ0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdh20Q8BIZ0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdh20Q8BIZ0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdh20Q8BIZ0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
Pcdh20Q8BIZ0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdh20Q8BIZ0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdh20Q8BIZ0 Zfp131-205ENSMUST00000223812 663 ntBASIC24.31■■□□□ 1.48
Pcdh20Q8BIZ0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdh20Q8BIZ0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdh20Q8BIZ0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdh20Q8BIZ0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdh20Q8BIZ0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdh20Q8BIZ0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdh20Q8BIZ0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdh20Q8BIZ0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.27■■□□□ 1.48
Pcdh20Q8BIZ0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdh20Q8BIZ0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdh20Q8BIZ0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdh20Q8BIZ0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.26■■□□□ 1.47
Pcdh20Q8BIZ0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Pcdh20Q8BIZ0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdh20Q8BIZ0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdh20Q8BIZ0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdh20Q8BIZ0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdh20Q8BIZ0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Pcdh20Q8BIZ0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdh20Q8BIZ0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdh20Q8BIZ0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdh20Q8BIZ0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdh20Q8BIZ0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdh20Q8BIZ0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.2■■□□□ 1.46
Pcdh20Q8BIZ0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdh20Q8BIZ0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdh20Q8BIZ0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdh20Q8BIZ0 Amer2-203ENSMUST00000225247 2662 ntBASIC24.18■■□□□ 1.46
Pcdh20Q8BIZ0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdh20Q8BIZ0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdh20Q8BIZ0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdh20Q8BIZ0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdh20Q8BIZ0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdh20Q8BIZ0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.13■■□□□ 1.45
Pcdh20Q8BIZ0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdh20Q8BIZ0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdh20Q8BIZ0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
Pcdh20Q8BIZ0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
Pcdh20Q8BIZ0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdh20Q8BIZ0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdh20Q8BIZ0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Pcdh20Q8BIZ0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdh20Q8BIZ0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.08■■□□□ 1.45
Pcdh20Q8BIZ0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdh20Q8BIZ0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdh20Q8BIZ0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.06■■□□□ 1.44
Pcdh20Q8BIZ0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.05■■□□□ 1.44
Pcdh20Q8BIZ0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdh20Q8BIZ0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdh20Q8BIZ0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdh20Q8BIZ0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdh20Q8BIZ0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.03■■□□□ 1.44
Pcdh20Q8BIZ0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdh20Q8BIZ0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdh20Q8BIZ0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
Pcdh20Q8BIZ0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcdh20Q8BIZ0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Pcdh20Q8BIZ0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdh20Q8BIZ0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.98■■□□□ 1.43
Pcdh20Q8BIZ0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdh20Q8BIZ0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdh20Q8BIZ0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Pcdh20Q8BIZ0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdh20Q8BIZ0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdh20Q8BIZ0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Pcdh20Q8BIZ0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdh20Q8BIZ0 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.95■■□□□ 1.42
Pcdh20Q8BIZ0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdh20Q8BIZ0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdh20Q8BIZ0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdh20Q8BIZ0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdh20Q8BIZ0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdh20Q8BIZ0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
Pcdh20Q8BIZ0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.91■■□□□ 1.42
Pcdh20Q8BIZ0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdh20Q8BIZ0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdh20Q8BIZ0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdh20Q8BIZ0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdh20Q8BIZ0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdh20Q8BIZ0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Pcdh20Q8BIZ0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.89■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms