Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.62■□□□□ 0.89
Atpaf1Q811I0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atpaf1Q811I0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atpaf1Q811I0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.61■□□□□ 0.89
Atpaf1Q811I0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Atpaf1Q811I0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atpaf1Q811I0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.6■□□□□ 0.89
Atpaf1Q811I0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atpaf1Q811I0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atpaf1Q811I0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atpaf1Q811I0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.57■□□□□ 0.88
Atpaf1Q811I0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atpaf1Q811I0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.56■□□□□ 0.88
Atpaf1Q811I0 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.56■□□□□ 0.88
Atpaf1Q811I0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atpaf1Q811I0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atpaf1Q811I0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atpaf1Q811I0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atpaf1Q811I0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Atpaf1Q811I0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atpaf1Q811I0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Atpaf1Q811I0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atpaf1Q811I0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atpaf1Q811I0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atpaf1Q811I0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atpaf1Q811I0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atpaf1Q811I0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atpaf1Q811I0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atpaf1Q811I0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atpaf1Q811I0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atpaf1Q811I0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Atpaf1Q811I0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atpaf1Q811I0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.47■□□□□ 0.87
Atpaf1Q811I0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atpaf1Q811I0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atpaf1Q811I0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atpaf1Q811I0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Atpaf1Q811I0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atpaf1Q811I0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Atpaf1Q811I0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atpaf1Q811I0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Atpaf1Q811I0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.44■□□□□ 0.86
Atpaf1Q811I0 Gm25238-201ENSMUST00000174914 89 ntBASIC20.43■□□□□ 0.86
Atpaf1Q811I0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.43■□□□□ 0.86
Atpaf1Q811I0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atpaf1Q811I0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Atpaf1Q811I0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atpaf1Q811I0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Atpaf1Q811I0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atpaf1Q811I0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atpaf1Q811I0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atpaf1Q811I0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Atpaf1Q811I0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atpaf1Q811I0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Atpaf1Q811I0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atpaf1Q811I0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atpaf1Q811I0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.34■□□□□ 0.85
Atpaf1Q811I0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Atpaf1Q811I0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atpaf1Q811I0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Atpaf1Q811I0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Atpaf1Q811I0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Atpaf1Q811I0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Atpaf1Q811I0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atpaf1Q811I0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atpaf1Q811I0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atpaf1Q811I0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atpaf1Q811I0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atpaf1Q811I0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atpaf1Q811I0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Atpaf1Q811I0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Atpaf1Q811I0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atpaf1Q811I0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.29■□□□□ 0.84
Atpaf1Q811I0 Mipep-204ENSMUST00000225043 1548 ntBASIC20.29■□□□□ 0.84
Atpaf1Q811I0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atpaf1Q811I0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atpaf1Q811I0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atpaf1Q811I0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Atpaf1Q811I0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atpaf1Q811I0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Atpaf1Q811I0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atpaf1Q811I0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atpaf1Q811I0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Atpaf1Q811I0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atpaf1Q811I0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atpaf1Q811I0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atpaf1Q811I0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atpaf1Q811I0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atpaf1Q811I0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atpaf1Q811I0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atpaf1Q811I0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atpaf1Q811I0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Atpaf1Q811I0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Atpaf1Q811I0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Atpaf1Q811I0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atpaf1Q811I0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Atpaf1Q811I0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atpaf1Q811I0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Atpaf1Q811I0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atpaf1Q811I0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 149 ms