Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Trnp1Q80ZI1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Trnp1Q80ZI1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Trnp1Q80ZI1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Trnp1Q80ZI1 Gm6821-201ENSMUST00000107540 542 ntBASIC29.9■■■□□ 2.38
Trnp1Q80ZI1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Trnp1Q80ZI1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
Trnp1Q80ZI1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Trnp1Q80ZI1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Trnp1Q80ZI1 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.85■■■□□ 2.37
Trnp1Q80ZI1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Trnp1Q80ZI1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.84■■■□□ 2.37
Trnp1Q80ZI1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Trnp1Q80ZI1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Trnp1Q80ZI1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Trnp1Q80ZI1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Trnp1Q80ZI1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
Trnp1Q80ZI1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Trnp1Q80ZI1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
Trnp1Q80ZI1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.75■■■□□ 2.35
Trnp1Q80ZI1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Trnp1Q80ZI1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
Trnp1Q80ZI1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.74■■■□□ 2.35
Trnp1Q80ZI1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Trnp1Q80ZI1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Trnp1Q80ZI1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Trnp1Q80ZI1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.73■■■□□ 2.35
Trnp1Q80ZI1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Trnp1Q80ZI1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29.7■■■□□ 2.34
Trnp1Q80ZI1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.68■■■□□ 2.34
Trnp1Q80ZI1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Trnp1Q80ZI1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Trnp1Q80ZI1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.62■■■□□ 2.33
Trnp1Q80ZI1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Trnp1Q80ZI1 AC157572.2-201ENSMUST00000226970 908 ntBASIC29.6■■■□□ 2.33
Trnp1Q80ZI1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Trnp1Q80ZI1 Gm42809-201ENSMUST00000198429 1138 ntBASIC29.57■■■□□ 2.32
Trnp1Q80ZI1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.55■■■□□ 2.32
Trnp1Q80ZI1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Trnp1Q80ZI1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
Trnp1Q80ZI1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
Trnp1Q80ZI1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Trnp1Q80ZI1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
Trnp1Q80ZI1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
Trnp1Q80ZI1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29.52■■■□□ 2.32
Trnp1Q80ZI1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.51■■■□□ 2.31
Trnp1Q80ZI1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Trnp1Q80ZI1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
Trnp1Q80ZI1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Trnp1Q80ZI1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29.49■■■□□ 2.31
Trnp1Q80ZI1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Trnp1Q80ZI1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
Trnp1Q80ZI1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Trnp1Q80ZI1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Trnp1Q80ZI1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Trnp1Q80ZI1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Trnp1Q80ZI1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Trnp1Q80ZI1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Trnp1Q80ZI1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Trnp1Q80ZI1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Trnp1Q80ZI1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
Trnp1Q80ZI1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Trnp1Q80ZI1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Trnp1Q80ZI1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29.41■■■□□ 2.3
Trnp1Q80ZI1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Trnp1Q80ZI1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Trnp1Q80ZI1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Trnp1Q80ZI1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29.36■■■□□ 2.29
Trnp1Q80ZI1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Trnp1Q80ZI1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Trnp1Q80ZI1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.35■■■□□ 2.29
Trnp1Q80ZI1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Trnp1Q80ZI1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Trnp1Q80ZI1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Trnp1Q80ZI1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Trnp1Q80ZI1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29.32■■■□□ 2.28
Trnp1Q80ZI1 Nkain2-201ENSMUST00000092602 558 ntBASIC29.32■■■□□ 2.28
Trnp1Q80ZI1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.31■■■□□ 2.28
Trnp1Q80ZI1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
Trnp1Q80ZI1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Trnp1Q80ZI1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Trnp1Q80ZI1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Trnp1Q80ZI1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.28■■■□□ 2.28
Trnp1Q80ZI1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29.28■■■□□ 2.28
Trnp1Q80ZI1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Trnp1Q80ZI1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
Trnp1Q80ZI1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Trnp1Q80ZI1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29.26■■■□□ 2.27
Trnp1Q80ZI1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Trnp1Q80ZI1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Trnp1Q80ZI1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Trnp1Q80ZI1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Trnp1Q80ZI1 Gm7432-201ENSMUST00000210343 879 ntBASIC29.25■■■□□ 2.27
Trnp1Q80ZI1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Trnp1Q80ZI1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Trnp1Q80ZI1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29.21■■■□□ 2.27
Trnp1Q80ZI1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Trnp1Q80ZI1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.18■■■□□ 2.26
Trnp1Q80ZI1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Trnp1Q80ZI1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms