Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29,48■■■□□ 2,31
Prpf40bQ80W14 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29,48■■■□□ 2,31
Prpf40bQ80W14 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29,47■■■□□ 2,31
Prpf40bQ80W14 Gm9939-201ENSMUST00000067161 1154 ntBASIC29,47■■■□□ 2,31
Prpf40bQ80W14 Gm24970-201ENSMUST00000175582 82 ntBASIC29,43■■■□□ 2,3
Prpf40bQ80W14 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29,41■■■□□ 2,3
Prpf40bQ80W14 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29,41■■■□□ 2,3
Prpf40bQ80W14 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29,41■■■□□ 2,3
Prpf40bQ80W14 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29,41■■■□□ 2,3
Prpf40bQ80W14 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29,4■■■□□ 2,3
Prpf40bQ80W14 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29,39■■■□□ 2,3
Prpf40bQ80W14 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29,37■■■□□ 2,29
Prpf40bQ80W14 Gm8503-201ENSMUST00000118131 455 ntBASIC29,36■■■□□ 2,29
Prpf40bQ80W14 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29,34■■■□□ 2,29
Prpf40bQ80W14 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29,33■■■□□ 2,29
Prpf40bQ80W14 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29,31■■■□□ 2,28
Prpf40bQ80W14 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29,28■■■□□ 2,28
Prpf40bQ80W14 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC29,24■■■□□ 2,27
Prpf40bQ80W14 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29,24■■■□□ 2,27
Prpf40bQ80W14 Gm6821-201ENSMUST00000107540 542 ntBASIC29,23■■■□□ 2,27
Prpf40bQ80W14 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29,23■■■□□ 2,27
Prpf40bQ80W14 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29,22■■■□□ 2,27
Prpf40bQ80W14 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29,22■■■□□ 2,27
Prpf40bQ80W14 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29,22■■■□□ 2,27
Prpf40bQ80W14 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29,18■■■□□ 2,26
Prpf40bQ80W14 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29,18■■■□□ 2,26
Prpf40bQ80W14 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29,18■■■□□ 2,26
Prpf40bQ80W14 Gm2415-204ENSMUST00000190235 2004 ntBASIC29,17■■■□□ 2,26
Prpf40bQ80W14 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29,17■■■□□ 2,26
Prpf40bQ80W14 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29,16■■■□□ 2,26
Prpf40bQ80W14 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29,16■■■□□ 2,26
Prpf40bQ80W14 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC29,15■■■□□ 2,26
Prpf40bQ80W14 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29,14■■■□□ 2,25
Prpf40bQ80W14 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29,13■■■□□ 2,25
Prpf40bQ80W14 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29,11■■■□□ 2,25
Prpf40bQ80W14 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29,11■■■□□ 2,25
Prpf40bQ80W14 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29,1■■■□□ 2,25
Prpf40bQ80W14 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC29,1■■■□□ 2,25
Prpf40bQ80W14 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29,09■■■□□ 2,25
Prpf40bQ80W14 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29,08■■■□□ 2,25
Prpf40bQ80W14 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC29,06■■■□□ 2,24
Prpf40bQ80W14 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29,05■■■□□ 2,24
Prpf40bQ80W14 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28,99■■■□□ 2,23
Prpf40bQ80W14 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28,99■■■□□ 2,23
Prpf40bQ80W14 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28,99■■■□□ 2,23
Prpf40bQ80W14 Gm6658-202ENSMUST00000209493 1885 ntBASIC28,97■■■□□ 2,23
Prpf40bQ80W14 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28,97■■■□□ 2,23
Prpf40bQ80W14 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC28,97■■■□□ 2,23
Prpf40bQ80W14 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28,96■■■□□ 2,23
Prpf40bQ80W14 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28,95■■■□□ 2,23
Prpf40bQ80W14 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28,94■■■□□ 2,22
Prpf40bQ80W14 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28,94■■■□□ 2,22
Prpf40bQ80W14 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28,93■■■□□ 2,22
Prpf40bQ80W14 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28,93■■■□□ 2,22
Prpf40bQ80W14 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28,91■■■□□ 2,22
Prpf40bQ80W14 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28,91■■■□□ 2,22
Prpf40bQ80W14 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28,91■■■□□ 2,22
Prpf40bQ80W14 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28,91■■■□□ 2,22
Prpf40bQ80W14 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28,9■■■□□ 2,22
Prpf40bQ80W14 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28,9■■■□□ 2,22
Prpf40bQ80W14 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28,89■■■□□ 2,22
Prpf40bQ80W14 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28,88■■■□□ 2,21
Prpf40bQ80W14 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28,87■■■□□ 2,21
Prpf40bQ80W14 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28,87■■■□□ 2,21
Prpf40bQ80W14 Gm43863-201ENSMUST00000203822 1192 ntBASIC28,87■■■□□ 2,21
Prpf40bQ80W14 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28,86■■■□□ 2,21
Prpf40bQ80W14 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28,81■■■□□ 2,2
Prpf40bQ80W14 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28,8■■■□□ 2,2
Prpf40bQ80W14 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28,8■■■□□ 2,2
Prpf40bQ80W14 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28,8■■■□□ 2,2
Prpf40bQ80W14 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28,79■■■□□ 2,2
Prpf40bQ80W14 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28,79■■■□□ 2,2
Prpf40bQ80W14 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28,78■■■□□ 2,2
Prpf40bQ80W14 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28,77■■■□□ 2,2
Prpf40bQ80W14 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28,77■■■□□ 2,2
Prpf40bQ80W14 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28,76■■■□□ 2,19
Prpf40bQ80W14 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28,74■■■□□ 2,19
Prpf40bQ80W14 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28,74■■■□□ 2,19
Prpf40bQ80W14 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28,72■■■□□ 2,19
Prpf40bQ80W14 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28,72■■■□□ 2,19
Prpf40bQ80W14 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28,71■■■□□ 2,19
Prpf40bQ80W14 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28,71■■■□□ 2,19
Prpf40bQ80W14 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28,71■■■□□ 2,19
Prpf40bQ80W14 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28,71■■■□□ 2,19
Prpf40bQ80W14 Gm42809-201ENSMUST00000198429 1138 ntBASIC28,7■■■□□ 2,18
Prpf40bQ80W14 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28,7■■■□□ 2,18
Prpf40bQ80W14 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28,68■■■□□ 2,18
Prpf40bQ80W14 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28,67■■■□□ 2,18
Prpf40bQ80W14 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28,67■■■□□ 2,18
Prpf40bQ80W14 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28,67■■■□□ 2,18
Prpf40bQ80W14 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Prpf40bQ80W14 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28,66■■■□□ 2,18
Prpf40bQ80W14 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28,66■■■□□ 2,18
Prpf40bQ80W14 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28,63■■■□□ 2,17
Prpf40bQ80W14 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28,62■■■□□ 2,17
Prpf40bQ80W14 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28,62■■■□□ 2,17
Prpf40bQ80W14 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28,62■■■□□ 2,17
Prpf40bQ80W14 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28,61■■■□□ 2,17
Prpf40bQ80W14 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28,61■■■□□ 2,17
Prpf40bQ80W14 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28,59■■■□□ 2,17
Retrieved 100 of 76,532 protein–RNA pairs in 17,1 ms