Protein–RNA interactions for Protein: Q80VG1

Scml4, Sex comb on midleg-like protein 4, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scml4Q80VG1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scml4Q80VG1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.51■■□□□ 1.03
Scml4Q80VG1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scml4Q80VG1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scml4Q80VG1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Scml4Q80VG1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Scml4Q80VG1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scml4Q80VG1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scml4Q80VG1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scml4Q80VG1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.49■■□□□ 1.03
Scml4Q80VG1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.48■■□□□ 1.03
Scml4Q80VG1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Scml4Q80VG1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scml4Q80VG1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Scml4Q80VG1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scml4Q80VG1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scml4Q80VG1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Scml4Q80VG1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.44■■□□□ 1.02
Scml4Q80VG1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scml4Q80VG1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scml4Q80VG1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.43■■□□□ 1.02
Scml4Q80VG1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scml4Q80VG1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scml4Q80VG1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scml4Q80VG1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Scml4Q80VG1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scml4Q80VG1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scml4Q80VG1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scml4Q80VG1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Scml4Q80VG1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scml4Q80VG1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scml4Q80VG1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scml4Q80VG1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scml4Q80VG1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Scml4Q80VG1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scml4Q80VG1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Scml4Q80VG1 Rab21-202ENSMUST00000218831 843 ntBASIC21.35■■□□□ 1.01
Scml4Q80VG1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Scml4Q80VG1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.35■■□□□ 1.01
Scml4Q80VG1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scml4Q80VG1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Scml4Q80VG1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Scml4Q80VG1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scml4Q80VG1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Scml4Q80VG1 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.31■■□□□ 1
Scml4Q80VG1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Scml4Q80VG1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.31■■□□□ 1
Scml4Q80VG1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.3■■□□□ 1
Scml4Q80VG1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Scml4Q80VG1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scml4Q80VG1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scml4Q80VG1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scml4Q80VG1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scml4Q80VG1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Scml4Q80VG1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Scml4Q80VG1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Scml4Q80VG1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scml4Q80VG1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scml4Q80VG1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Scml4Q80VG1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.25■□□□□ 0.99
Scml4Q80VG1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.24■□□□□ 0.99
Scml4Q80VG1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scml4Q80VG1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scml4Q80VG1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scml4Q80VG1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Scml4Q80VG1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scml4Q80VG1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scml4Q80VG1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scml4Q80VG1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Scml4Q80VG1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scml4Q80VG1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scml4Q80VG1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scml4Q80VG1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scml4Q80VG1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scml4Q80VG1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scml4Q80VG1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scml4Q80VG1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scml4Q80VG1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scml4Q80VG1 Gm25262-201ENSMUST00000174934 133 ntBASIC21.14■□□□□ 0.97
Scml4Q80VG1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.14■□□□□ 0.97
Scml4Q80VG1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scml4Q80VG1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scml4Q80VG1 Mipep-204ENSMUST00000225043 1548 ntBASIC21.13■□□□□ 0.97
Scml4Q80VG1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scml4Q80VG1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scml4Q80VG1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scml4Q80VG1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scml4Q80VG1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scml4Q80VG1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scml4Q80VG1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scml4Q80VG1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Scml4Q80VG1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Scml4Q80VG1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Scml4Q80VG1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Scml4Q80VG1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scml4Q80VG1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scml4Q80VG1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Scml4Q80VG1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Scml4Q80VG1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scml4Q80VG1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms