Protein–RNA interactions for Protein: Q7TQK5

Ccdc93, Coiled-coil domain-containing protein 93, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc93Q7TQK5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.09■■■□□ 2.57
Ccdc93Q7TQK5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc93Q7TQK5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ccdc93Q7TQK5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.07■■■□□ 2.56
Ccdc93Q7TQK5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ccdc93Q7TQK5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc93Q7TQK5 Gm6821-201ENSMUST00000107540 542 ntBASIC31.01■■■□□ 2.55
Ccdc93Q7TQK5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc93Q7TQK5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ccdc93Q7TQK5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Ccdc93Q7TQK5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc93Q7TQK5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Ccdc93Q7TQK5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ccdc93Q7TQK5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ccdc93Q7TQK5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Ccdc93Q7TQK5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ccdc93Q7TQK5 Gm43863-201ENSMUST00000203822 1192 ntBASIC30.93■■■□□ 2.54
Ccdc93Q7TQK5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
Ccdc93Q7TQK5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ccdc93Q7TQK5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.89■■■□□ 2.54
Ccdc93Q7TQK5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.89■■■□□ 2.53
Ccdc93Q7TQK5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
Ccdc93Q7TQK5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Ccdc93Q7TQK5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ccdc93Q7TQK5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ccdc93Q7TQK5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ccdc93Q7TQK5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Ccdc93Q7TQK5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ccdc93Q7TQK5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.8■■■□□ 2.52
Ccdc93Q7TQK5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc93Q7TQK5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
Ccdc93Q7TQK5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
Ccdc93Q7TQK5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc93Q7TQK5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
Ccdc93Q7TQK5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.52
Ccdc93Q7TQK5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.76■■■□□ 2.51
Ccdc93Q7TQK5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ccdc93Q7TQK5 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.68■■■□□ 2.5
Ccdc93Q7TQK5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ccdc93Q7TQK5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Ccdc93Q7TQK5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.66■■■□□ 2.5
Ccdc93Q7TQK5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ccdc93Q7TQK5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Ccdc93Q7TQK5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Ccdc93Q7TQK5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Ccdc93Q7TQK5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc93Q7TQK5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.62■■■□□ 2.49
Ccdc93Q7TQK5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Ccdc93Q7TQK5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Ccdc93Q7TQK5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.6■■■□□ 2.49
Ccdc93Q7TQK5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ccdc93Q7TQK5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ccdc93Q7TQK5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
Ccdc93Q7TQK5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.58■■■□□ 2.49
Ccdc93Q7TQK5 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.58■■■□□ 2.49
Ccdc93Q7TQK5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ccdc93Q7TQK5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ccdc93Q7TQK5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Ccdc93Q7TQK5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
Ccdc93Q7TQK5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc93Q7TQK5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.53■■■□□ 2.48
Ccdc93Q7TQK5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ccdc93Q7TQK5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ccdc93Q7TQK5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Ccdc93Q7TQK5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Ccdc93Q7TQK5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Ccdc93Q7TQK5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc93Q7TQK5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ccdc93Q7TQK5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ccdc93Q7TQK5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc93Q7TQK5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc93Q7TQK5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.45■■■□□ 2.47
Ccdc93Q7TQK5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.45■■■□□ 2.47
Ccdc93Q7TQK5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Ccdc93Q7TQK5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc93Q7TQK5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc93Q7TQK5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc93Q7TQK5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ccdc93Q7TQK5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.4■■■□□ 2.46
Ccdc93Q7TQK5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.39■■■□□ 2.46
Ccdc93Q7TQK5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Ccdc93Q7TQK5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Ccdc93Q7TQK5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
Ccdc93Q7TQK5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.37■■■□□ 2.45
Ccdc93Q7TQK5 Nkain2-201ENSMUST00000092602 558 ntBASIC30.37■■■□□ 2.45
Ccdc93Q7TQK5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc93Q7TQK5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.34■■■□□ 2.45
Ccdc93Q7TQK5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc93Q7TQK5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.34■■■□□ 2.45
Ccdc93Q7TQK5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc93Q7TQK5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.33■■■□□ 2.45
Ccdc93Q7TQK5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc93Q7TQK5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc93Q7TQK5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc93Q7TQK5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc93Q7TQK5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc93Q7TQK5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc93Q7TQK5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ccdc93Q7TQK5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc93Q7TQK5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms