Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Npc1l1Q6T3U4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Npc1l1Q6T3U4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Npc1l1Q6T3U4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
Npc1l1Q6T3U4 Gm9397-201ENSMUST00000200125 605 ntBASIC30.95■■■□□ 2.54
Npc1l1Q6T3U4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Npc1l1Q6T3U4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.54
Npc1l1Q6T3U4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.95■■■□□ 2.54
Npc1l1Q6T3U4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Npc1l1Q6T3U4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Npc1l1Q6T3U4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Npc1l1Q6T3U4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Npc1l1Q6T3U4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Npc1l1Q6T3U4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.92■■■□□ 2.54
Npc1l1Q6T3U4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
Npc1l1Q6T3U4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Npc1l1Q6T3U4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
Npc1l1Q6T3U4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Npc1l1Q6T3U4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Npc1l1Q6T3U4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.86■■■□□ 2.53
Npc1l1Q6T3U4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
Npc1l1Q6T3U4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Npc1l1Q6T3U4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Npc1l1Q6T3U4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.84■■■□□ 2.53
Npc1l1Q6T3U4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Npc1l1Q6T3U4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Npc1l1Q6T3U4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Npc1l1Q6T3U4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Npc1l1Q6T3U4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Npc1l1Q6T3U4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.8■■■□□ 2.52
Npc1l1Q6T3U4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.79■■■□□ 2.52
Npc1l1Q6T3U4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.78■■■□□ 2.52
Npc1l1Q6T3U4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Npc1l1Q6T3U4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
Npc1l1Q6T3U4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.76■■■□□ 2.52
Npc1l1Q6T3U4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Npc1l1Q6T3U4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Npc1l1Q6T3U4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Npc1l1Q6T3U4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Npc1l1Q6T3U4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Npc1l1Q6T3U4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Npc1l1Q6T3U4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Npc1l1Q6T3U4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.72■■■□□ 2.51
Npc1l1Q6T3U4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
Npc1l1Q6T3U4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Npc1l1Q6T3U4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Npc1l1Q6T3U4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Npc1l1Q6T3U4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Npc1l1Q6T3U4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
Npc1l1Q6T3U4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Npc1l1Q6T3U4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Npc1l1Q6T3U4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.65■■■□□ 2.5
Npc1l1Q6T3U4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Npc1l1Q6T3U4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
Npc1l1Q6T3U4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Npc1l1Q6T3U4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Npc1l1Q6T3U4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.63■■■□□ 2.49
Npc1l1Q6T3U4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Npc1l1Q6T3U4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Npc1l1Q6T3U4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.61■■■□□ 2.49
Npc1l1Q6T3U4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Npc1l1Q6T3U4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
Npc1l1Q6T3U4 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.57■■■□□ 2.48
Npc1l1Q6T3U4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Npc1l1Q6T3U4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
Npc1l1Q6T3U4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Npc1l1Q6T3U4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.55■■■□□ 2.48
Npc1l1Q6T3U4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Npc1l1Q6T3U4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.54■■■□□ 2.48
Npc1l1Q6T3U4 Gm24970-201ENSMUST00000175582 82 ntBASIC30.54■■■□□ 2.48
Npc1l1Q6T3U4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Npc1l1Q6T3U4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Npc1l1Q6T3U4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Npc1l1Q6T3U4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Npc1l1Q6T3U4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Npc1l1Q6T3U4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.51■■■□□ 2.48
Npc1l1Q6T3U4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Npc1l1Q6T3U4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.49■■■□□ 2.47
Npc1l1Q6T3U4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Npc1l1Q6T3U4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Npc1l1Q6T3U4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Npc1l1Q6T3U4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Npc1l1Q6T3U4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Npc1l1Q6T3U4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
Npc1l1Q6T3U4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
Npc1l1Q6T3U4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Npc1l1Q6T3U4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
Npc1l1Q6T3U4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Npc1l1Q6T3U4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.41■■■□□ 2.46
Npc1l1Q6T3U4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Npc1l1Q6T3U4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Npc1l1Q6T3U4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.4■■■□□ 2.46
Npc1l1Q6T3U4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
Npc1l1Q6T3U4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.36■■■□□ 2.45
Npc1l1Q6T3U4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Npc1l1Q6T3U4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Npc1l1Q6T3U4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.33■■■□□ 2.45
Npc1l1Q6T3U4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Npc1l1Q6T3U4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.31■■■□□ 2.44
Npc1l1Q6T3U4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms