Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Amer2-203ENSMUST00000225247 2662 ntBASIC21.22■□□□□ 0.99
Ccdc36Q6PDM4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ccdc36Q6PDM4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc36Q6PDM4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc36Q6PDM4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ccdc36Q6PDM4 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.19■□□□□ 0.98
Ccdc36Q6PDM4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc36Q6PDM4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.19■□□□□ 0.98
Ccdc36Q6PDM4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc36Q6PDM4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc36Q6PDM4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ccdc36Q6PDM4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc36Q6PDM4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Ccdc36Q6PDM4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc36Q6PDM4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc36Q6PDM4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc36Q6PDM4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc36Q6PDM4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc36Q6PDM4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc36Q6PDM4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.13■□□□□ 0.97
Ccdc36Q6PDM4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc36Q6PDM4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc36Q6PDM4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Ccdc36Q6PDM4 Gm26115-201ENSMUST00000175605 87 ntBASIC21.11■□□□□ 0.97
Ccdc36Q6PDM4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc36Q6PDM4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc36Q6PDM4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc36Q6PDM4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc36Q6PDM4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ccdc36Q6PDM4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc36Q6PDM4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Ccdc36Q6PDM4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc36Q6PDM4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc36Q6PDM4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc36Q6PDM4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc36Q6PDM4 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.05■□□□□ 0.96
Ccdc36Q6PDM4 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.05■□□□□ 0.96
Ccdc36Q6PDM4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Ccdc36Q6PDM4 Gm27322-201ENSMUST00000184007 104 ntBASIC21.04■□□□□ 0.96
Ccdc36Q6PDM4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc36Q6PDM4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc36Q6PDM4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc36Q6PDM4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc36Q6PDM4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc36Q6PDM4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc36Q6PDM4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc36Q6PDM4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc36Q6PDM4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc36Q6PDM4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc36Q6PDM4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21■□□□□ 0.95
Ccdc36Q6PDM4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc36Q6PDM4 Gm8109-201ENSMUST00000194076 746 ntBASIC20.98■□□□□ 0.95
Ccdc36Q6PDM4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc36Q6PDM4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc36Q6PDM4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc36Q6PDM4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc36Q6PDM4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc36Q6PDM4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc36Q6PDM4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.95■□□□□ 0.94
Ccdc36Q6PDM4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc36Q6PDM4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
Ccdc36Q6PDM4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc36Q6PDM4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc36Q6PDM4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc36Q6PDM4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc36Q6PDM4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc36Q6PDM4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc36Q6PDM4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc36Q6PDM4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc36Q6PDM4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc36Q6PDM4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc36Q6PDM4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.88■□□□□ 0.93
Ccdc36Q6PDM4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.87■□□□□ 0.93
Ccdc36Q6PDM4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc36Q6PDM4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc36Q6PDM4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc36Q6PDM4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc36Q6PDM4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc36Q6PDM4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.85■□□□□ 0.93
Ccdc36Q6PDM4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc36Q6PDM4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc36Q6PDM4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Ccdc36Q6PDM4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc36Q6PDM4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc36Q6PDM4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc36Q6PDM4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc36Q6PDM4 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.81■□□□□ 0.92
Ccdc36Q6PDM4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc36Q6PDM4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc36Q6PDM4 Mipep-204ENSMUST00000225043 1548 ntBASIC20.79■□□□□ 0.92
Ccdc36Q6PDM4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc36Q6PDM4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc36Q6PDM4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc36Q6PDM4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.77■□□□□ 0.92
Ccdc36Q6PDM4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Ccdc36Q6PDM4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc36Q6PDM4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc36Q6PDM4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc36Q6PDM4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc36Q6PDM4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms