Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Amer2-203ENSMUST00000225247 2662 ntBASIC21.22■□□□□ 0.99
Ccdc36Q6PDM4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ccdc36Q6PDM4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc36Q6PDM4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc36Q6PDM4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ccdc36Q6PDM4 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.19■□□□□ 0.98
Ccdc36Q6PDM4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc36Q6PDM4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.19■□□□□ 0.98
Ccdc36Q6PDM4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc36Q6PDM4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc36Q6PDM4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ccdc36Q6PDM4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc36Q6PDM4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Ccdc36Q6PDM4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc36Q6PDM4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc36Q6PDM4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc36Q6PDM4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc36Q6PDM4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc36Q6PDM4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc36Q6PDM4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.13■□□□□ 0.97
Ccdc36Q6PDM4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc36Q6PDM4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc36Q6PDM4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Ccdc36Q6PDM4 Gm26115-201ENSMUST00000175605 87 ntBASIC21.11■□□□□ 0.97
Ccdc36Q6PDM4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc36Q6PDM4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc36Q6PDM4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc36Q6PDM4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc36Q6PDM4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ccdc36Q6PDM4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc36Q6PDM4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Ccdc36Q6PDM4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc36Q6PDM4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc36Q6PDM4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc36Q6PDM4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc36Q6PDM4 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.05■□□□□ 0.96
Ccdc36Q6PDM4 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.05■□□□□ 0.96
Ccdc36Q6PDM4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Ccdc36Q6PDM4 Gm27322-201ENSMUST00000184007 104 ntBASIC21.04■□□□□ 0.96
Ccdc36Q6PDM4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc36Q6PDM4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc36Q6PDM4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc36Q6PDM4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc36Q6PDM4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc36Q6PDM4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc36Q6PDM4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc36Q6PDM4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc36Q6PDM4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc36Q6PDM4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc36Q6PDM4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21■□□□□ 0.95
Ccdc36Q6PDM4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc36Q6PDM4 Gm8109-201ENSMUST00000194076 746 ntBASIC20.98■□□□□ 0.95
Ccdc36Q6PDM4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc36Q6PDM4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc36Q6PDM4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc36Q6PDM4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc36Q6PDM4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc36Q6PDM4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc36Q6PDM4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.95■□□□□ 0.94
Ccdc36Q6PDM4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc36Q6PDM4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
Ccdc36Q6PDM4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc36Q6PDM4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc36Q6PDM4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc36Q6PDM4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc36Q6PDM4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc36Q6PDM4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc36Q6PDM4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc36Q6PDM4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc36Q6PDM4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc36Q6PDM4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc36Q6PDM4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.88■□□□□ 0.93
Ccdc36Q6PDM4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.87■□□□□ 0.93
Ccdc36Q6PDM4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc36Q6PDM4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc36Q6PDM4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc36Q6PDM4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc36Q6PDM4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc36Q6PDM4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.85■□□□□ 0.93
Ccdc36Q6PDM4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc36Q6PDM4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc36Q6PDM4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Ccdc36Q6PDM4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc36Q6PDM4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc36Q6PDM4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc36Q6PDM4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc36Q6PDM4 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.81■□□□□ 0.92
Ccdc36Q6PDM4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc36Q6PDM4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc36Q6PDM4 Mipep-204ENSMUST00000225043 1548 ntBASIC20.79■□□□□ 0.92
Ccdc36Q6PDM4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc36Q6PDM4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc36Q6PDM4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc36Q6PDM4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.77■□□□□ 0.92
Ccdc36Q6PDM4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Ccdc36Q6PDM4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc36Q6PDM4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc36Q6PDM4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc36Q6PDM4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc36Q6PDM4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms