Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tgfbr1Q64729 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Tgfbr1Q64729 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
Tgfbr1Q64729 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Tgfbr1Q64729 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tgfbr1Q64729 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.39■□□□□ 0.85
Tgfbr1Q64729 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.38■□□□□ 0.85
Tgfbr1Q64729 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tgfbr1Q64729 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Tgfbr1Q64729 Gm27322-201ENSMUST00000184007 104 ntBASIC20.37■□□□□ 0.85
Tgfbr1Q64729 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tgfbr1Q64729 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tgfbr1Q64729 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tgfbr1Q64729 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.35■□□□□ 0.85
Tgfbr1Q64729 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tgfbr1Q64729 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tgfbr1Q64729 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tgfbr1Q64729 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tgfbr1Q64729 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tgfbr1Q64729 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tgfbr1Q64729 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tgfbr1Q64729 Amer2-203ENSMUST00000225247 2662 ntBASIC20.32■□□□□ 0.84
Tgfbr1Q64729 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tgfbr1Q64729 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tgfbr1Q64729 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
Tgfbr1Q64729 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tgfbr1Q64729 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tgfbr1Q64729 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tgfbr1Q64729 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tgfbr1Q64729 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr1Q64729 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr1Q64729 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Tgfbr1Q64729 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tgfbr1Q64729 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tgfbr1Q64729 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr1Q64729 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr1Q64729 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr1Q64729 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfbr1Q64729 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfbr1Q64729 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Tgfbr1Q64729 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.23■□□□□ 0.83
Tgfbr1Q64729 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tgfbr1Q64729 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tgfbr1Q64729 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tgfbr1Q64729 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tgfbr1Q64729 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.2■□□□□ 0.82
Tgfbr1Q64729 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.2■□□□□ 0.82
Tgfbr1Q64729 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tgfbr1Q64729 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tgfbr1Q64729 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tgfbr1Q64729 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.16■□□□□ 0.82
Tgfbr1Q64729 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tgfbr1Q64729 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Tgfbr1Q64729 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Tgfbr1Q64729 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tgfbr1Q64729 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tgfbr1Q64729 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tgfbr1Q64729 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tgfbr1Q64729 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tgfbr1Q64729 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Tgfbr1Q64729 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
Tgfbr1Q64729 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfbr1Q64729 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfbr1Q64729 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Tgfbr1Q64729 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfbr1Q64729 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfbr1Q64729 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tgfbr1Q64729 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.12■□□□□ 0.81
Tgfbr1Q64729 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tgfbr1Q64729 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Tgfbr1Q64729 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.1■□□□□ 0.81
Tgfbr1Q64729 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tgfbr1Q64729 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tgfbr1Q64729 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tgfbr1Q64729 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Tgfbr1Q64729 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tgfbr1Q64729 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tgfbr1Q64729 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tgfbr1Q64729 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tgfbr1Q64729 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tgfbr1Q64729 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.05■□□□□ 0.8
Tgfbr1Q64729 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.04■□□□□ 0.8
Tgfbr1Q64729 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tgfbr1Q64729 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.03■□□□□ 0.8
Tgfbr1Q64729 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tgfbr1Q64729 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tgfbr1Q64729 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.03■□□□□ 0.8
Tgfbr1Q64729 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tgfbr1Q64729 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tgfbr1Q64729 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tgfbr1Q64729 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tgfbr1Q64729 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tgfbr1Q64729 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Tgfbr1Q64729 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tgfbr1Q64729 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tgfbr1Q64729 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tgfbr1Q64729 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.99■□□□□ 0.79
Tgfbr1Q64729 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.98■□□□□ 0.79
Tgfbr1Q64729 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tgfbr1Q64729 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms