Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Clcn1Q64347 Gm24970-201ENSMUST00000175582 82 ntBASIC32.78■■■□□ 2.84
Clcn1Q64347 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Clcn1Q64347 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC32.77■■■□□ 2.84
Clcn1Q64347 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
Clcn1Q64347 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC32.76■■■□□ 2.84
Clcn1Q64347 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
Clcn1Q64347 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Clcn1Q64347 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Clcn1Q64347 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC32.75■■■□□ 2.83
Clcn1Q64347 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Clcn1Q64347 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC32.74■■■□□ 2.83
Clcn1Q64347 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC32.74■■■□□ 2.83
Clcn1Q64347 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Clcn1Q64347 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC32.73■■■□□ 2.83
Clcn1Q64347 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC32.73■■■□□ 2.83
Clcn1Q64347 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC32.72■■■□□ 2.83
Clcn1Q64347 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC32.71■■■□□ 2.83
Clcn1Q64347 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Clcn1Q64347 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC32.7■■■□□ 2.83
Clcn1Q64347 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
Clcn1Q64347 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Clcn1Q64347 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Clcn1Q64347 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Clcn1Q64347 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Clcn1Q64347 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
Clcn1Q64347 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC32.65■■■□□ 2.82
Clcn1Q64347 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC32.63■■■□□ 2.81
Clcn1Q64347 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Clcn1Q64347 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Clcn1Q64347 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.55■■■□□ 2.8
Clcn1Q64347 Gm9939-201ENSMUST00000067161 1154 ntBASIC32.55■■■□□ 2.8
Clcn1Q64347 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Clcn1Q64347 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Clcn1Q64347 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
Clcn1Q64347 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Clcn1Q64347 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Clcn1Q64347 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC32.46■■■□□ 2.79
Clcn1Q64347 Gm43863-201ENSMUST00000203822 1192 ntBASIC32.45■■■□□ 2.79
Clcn1Q64347 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Clcn1Q64347 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Clcn1Q64347 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Clcn1Q64347 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Clcn1Q64347 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Clcn1Q64347 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
Clcn1Q64347 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
Clcn1Q64347 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Clcn1Q64347 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC32.37■■■□□ 2.77
Clcn1Q64347 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
Clcn1Q64347 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Clcn1Q64347 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Clcn1Q64347 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Clcn1Q64347 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Clcn1Q64347 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Clcn1Q64347 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Clcn1Q64347 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Clcn1Q64347 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Clcn1Q64347 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Clcn1Q64347 Gm8503-201ENSMUST00000118131 455 ntBASIC32.31■■■□□ 2.76
Clcn1Q64347 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Clcn1Q64347 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Clcn1Q64347 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
Clcn1Q64347 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
Clcn1Q64347 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Clcn1Q64347 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC32.27■■■□□ 2.76
Clcn1Q64347 Gm6821-201ENSMUST00000107540 542 ntBASIC32.26■■■□□ 2.75
Clcn1Q64347 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC32.26■■■□□ 2.75
Clcn1Q64347 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Clcn1Q64347 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Clcn1Q64347 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC32.25■■■□□ 2.75
Clcn1Q64347 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Clcn1Q64347 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC32.24■■■□□ 2.75
Clcn1Q64347 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
Clcn1Q64347 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
Clcn1Q64347 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Clcn1Q64347 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Clcn1Q64347 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
Clcn1Q64347 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
Clcn1Q64347 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Clcn1Q64347 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Clcn1Q64347 AC157572.2-201ENSMUST00000226970 908 ntBASIC32.14■■■□□ 2.74
Clcn1Q64347 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
Clcn1Q64347 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
Clcn1Q64347 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC32.12■■■□□ 2.73
Clcn1Q64347 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC32.11■■■□□ 2.73
Clcn1Q64347 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Clcn1Q64347 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC32.1■■■□□ 2.73
Clcn1Q64347 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Clcn1Q64347 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Clcn1Q64347 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC32.09■■■□□ 2.73
Clcn1Q64347 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Clcn1Q64347 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Clcn1Q64347 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Clcn1Q64347 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
Clcn1Q64347 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Clcn1Q64347 Gm42809-201ENSMUST00000198429 1138 ntBASIC32.05■■■□□ 2.72
Clcn1Q64347 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Clcn1Q64347 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Clcn1Q64347 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
Clcn1Q64347 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms