Protein–RNA interactions for Protein: Q64221

Nhlh2, Helix-loop-helix protein 2, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlh2Q64221 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nhlh2Q64221 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nhlh2Q64221 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nhlh2Q64221 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Nhlh2Q64221 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nhlh2Q64221 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nhlh2Q64221 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nhlh2Q64221 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nhlh2Q64221 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nhlh2Q64221 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nhlh2Q64221 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nhlh2Q64221 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.44■□□□□ 0.86
Nhlh2Q64221 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nhlh2Q64221 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Nhlh2Q64221 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nhlh2Q64221 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nhlh2Q64221 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nhlh2Q64221 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nhlh2Q64221 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Nhlh2Q64221 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nhlh2Q64221 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nhlh2Q64221 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nhlh2Q64221 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nhlh2Q64221 Gm27322-201ENSMUST00000184007 104 ntBASIC20.39■□□□□ 0.85
Nhlh2Q64221 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.38■□□□□ 0.85
Nhlh2Q64221 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Nhlh2Q64221 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.38■□□□□ 0.85
Nhlh2Q64221 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nhlh2Q64221 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nhlh2Q64221 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nhlh2Q64221 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nhlh2Q64221 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.36■□□□□ 0.85
Nhlh2Q64221 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
Nhlh2Q64221 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nhlh2Q64221 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nhlh2Q64221 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Nhlh2Q64221 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nhlh2Q64221 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nhlh2Q64221 Amer2-203ENSMUST00000225247 2662 ntBASIC20.34■□□□□ 0.85
Nhlh2Q64221 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nhlh2Q64221 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nhlh2Q64221 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nhlh2Q64221 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.31■□□□□ 0.84
Nhlh2Q64221 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nhlh2Q64221 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nhlh2Q64221 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Nhlh2Q64221 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Nhlh2Q64221 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Nhlh2Q64221 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nhlh2Q64221 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.28■□□□□ 0.84
Nhlh2Q64221 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nhlh2Q64221 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nhlh2Q64221 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Nhlh2Q64221 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nhlh2Q64221 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nhlh2Q64221 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nhlh2Q64221 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
Nhlh2Q64221 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nhlh2Q64221 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nhlh2Q64221 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nhlh2Q64221 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Nhlh2Q64221 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nhlh2Q64221 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nhlh2Q64221 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nhlh2Q64221 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nhlh2Q64221 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nhlh2Q64221 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nhlh2Q64221 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nhlh2Q64221 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nhlh2Q64221 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.21■□□□□ 0.83
Nhlh2Q64221 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nhlh2Q64221 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Nhlh2Q64221 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nhlh2Q64221 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nhlh2Q64221 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.19■□□□□ 0.82
Nhlh2Q64221 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nhlh2Q64221 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.17■□□□□ 0.82
Nhlh2Q64221 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nhlh2Q64221 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Nhlh2Q64221 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.16■□□□□ 0.82
Nhlh2Q64221 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nhlh2Q64221 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.15■□□□□ 0.82
Nhlh2Q64221 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nhlh2Q64221 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nhlh2Q64221 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nhlh2Q64221 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nhlh2Q64221 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nhlh2Q64221 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.12■□□□□ 0.81
Nhlh2Q64221 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nhlh2Q64221 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nhlh2Q64221 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.11■□□□□ 0.81
Nhlh2Q64221 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nhlh2Q64221 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.11■□□□□ 0.81
Nhlh2Q64221 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.1■□□□□ 0.81
Nhlh2Q64221 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nhlh2Q64221 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nhlh2Q64221 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nhlh2Q64221 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nhlh2Q64221 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.08■□□□□ 0.81
Nhlh2Q64221 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms