Protein–RNA interactions for Protein: Q62471

Lcn3, Vomeronasal secretory protein 1, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcn3Q62471 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.55■■□□□ 1.04
Lcn3Q62471 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Lcn3Q62471 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lcn3Q62471 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.54■■□□□ 1.04
Lcn3Q62471 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lcn3Q62471 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lcn3Q62471 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lcn3Q62471 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Lcn3Q62471 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lcn3Q62471 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lcn3Q62471 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lcn3Q62471 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Lcn3Q62471 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lcn3Q62471 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lcn3Q62471 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Lcn3Q62471 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lcn3Q62471 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lcn3Q62471 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.46■■□□□ 1.03
Lcn3Q62471 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lcn3Q62471 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Lcn3Q62471 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lcn3Q62471 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.44■■□□□ 1.02
Lcn3Q62471 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lcn3Q62471 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Lcn3Q62471 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lcn3Q62471 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lcn3Q62471 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.43■■□□□ 1.02
Lcn3Q62471 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lcn3Q62471 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lcn3Q62471 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lcn3Q62471 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.43■■□□□ 1.02
Lcn3Q62471 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lcn3Q62471 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lcn3Q62471 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.41■■□□□ 1.02
Lcn3Q62471 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.4■■□□□ 1.02
Lcn3Q62471 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lcn3Q62471 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.38■■□□□ 1.01
Lcn3Q62471 Rab21-202ENSMUST00000218831 843 ntBASIC21.38■■□□□ 1.01
Lcn3Q62471 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lcn3Q62471 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lcn3Q62471 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lcn3Q62471 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lcn3Q62471 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lcn3Q62471 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Lcn3Q62471 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lcn3Q62471 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lcn3Q62471 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lcn3Q62471 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lcn3Q62471 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.32■■□□□ 1
Lcn3Q62471 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.32■■□□□ 1
Lcn3Q62471 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Lcn3Q62471 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.31■■□□□ 1
Lcn3Q62471 Amer2-203ENSMUST00000225247 2662 ntBASIC21.31■■□□□ 1
Lcn3Q62471 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lcn3Q62471 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Lcn3Q62471 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Lcn3Q62471 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lcn3Q62471 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lcn3Q62471 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Lcn3Q62471 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lcn3Q62471 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Lcn3Q62471 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Lcn3Q62471 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lcn3Q62471 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Lcn3Q62471 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lcn3Q62471 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lcn3Q62471 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lcn3Q62471 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Lcn3Q62471 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.24■□□□□ 0.99
Lcn3Q62471 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lcn3Q62471 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lcn3Q62471 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.23■□□□□ 0.99
Lcn3Q62471 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Lcn3Q62471 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lcn3Q62471 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lcn3Q62471 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Lcn3Q62471 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lcn3Q62471 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.21■□□□□ 0.99
Lcn3Q62471 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lcn3Q62471 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lcn3Q62471 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lcn3Q62471 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lcn3Q62471 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lcn3Q62471 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lcn3Q62471 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lcn3Q62471 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Lcn3Q62471 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lcn3Q62471 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lcn3Q62471 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lcn3Q62471 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lcn3Q62471 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lcn3Q62471 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lcn3Q62471 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lcn3Q62471 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lcn3Q62471 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Lcn3Q62471 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Lcn3Q62471 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Lcn3Q62471 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lcn3Q62471 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.13■□□□□ 0.97
Lcn3Q62471 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms