Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32.29■■■□□ 2.76
Irf9Q61179 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC32.28■■■□□ 2.76
Irf9Q61179 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Irf9Q61179 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Irf9Q61179 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Irf9Q61179 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
Irf9Q61179 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC32.26■■■□□ 2.76
Irf9Q61179 Gm6658-202ENSMUST00000209493 1885 ntBASIC32.26■■■□□ 2.75
Irf9Q61179 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC32.26■■■□□ 2.75
Irf9Q61179 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Irf9Q61179 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Irf9Q61179 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC32.24■■■□□ 2.75
Irf9Q61179 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC32.24■■■□□ 2.75
Irf9Q61179 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
Irf9Q61179 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Irf9Q61179 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Irf9Q61179 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Irf9Q61179 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Irf9Q61179 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
Irf9Q61179 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Irf9Q61179 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC32.22■■■□□ 2.75
Irf9Q61179 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
Irf9Q61179 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.19■■■□□ 2.74
Irf9Q61179 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
Irf9Q61179 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Irf9Q61179 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
Irf9Q61179 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Irf9Q61179 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Irf9Q61179 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC32.16■■■□□ 2.74
Irf9Q61179 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC32.16■■■□□ 2.74
Irf9Q61179 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC32.15■■■□□ 2.74
Irf9Q61179 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Irf9Q61179 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Irf9Q61179 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Irf9Q61179 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC32.12■■■□□ 2.73
Irf9Q61179 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC32.12■■■□□ 2.73
Irf9Q61179 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC32.1■■■□□ 2.73
Irf9Q61179 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC32.07■■■□□ 2.72
Irf9Q61179 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Irf9Q61179 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Irf9Q61179 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC32.05■■■□□ 2.72
Irf9Q61179 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC32.03■■■□□ 2.72
Irf9Q61179 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
Irf9Q61179 Gm24970-201ENSMUST00000175582 82 ntBASIC32.01■■■□□ 2.71
Irf9Q61179 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
Irf9Q61179 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC32■■■□□ 2.71
Irf9Q61179 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Irf9Q61179 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Irf9Q61179 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Irf9Q61179 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Irf9Q61179 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Irf9Q61179 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
Irf9Q61179 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.95■■■□□ 2.7
Irf9Q61179 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Irf9Q61179 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
Irf9Q61179 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Irf9Q61179 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Irf9Q61179 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Irf9Q61179 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Irf9Q61179 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Irf9Q61179 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Irf9Q61179 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Irf9Q61179 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC31.89■■■□□ 2.7
Irf9Q61179 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC31.89■■■□□ 2.7
Irf9Q61179 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Irf9Q61179 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Irf9Q61179 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Irf9Q61179 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Irf9Q61179 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Irf9Q61179 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Irf9Q61179 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.82■■■□□ 2.68
Irf9Q61179 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.82■■■□□ 2.68
Irf9Q61179 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
Irf9Q61179 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Irf9Q61179 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Irf9Q61179 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Irf9Q61179 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Irf9Q61179 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
Irf9Q61179 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Irf9Q61179 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
Irf9Q61179 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Irf9Q61179 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
Irf9Q61179 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Irf9Q61179 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Irf9Q61179 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Irf9Q61179 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Irf9Q61179 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.69■■■□□ 2.66
Irf9Q61179 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.69■■■□□ 2.66
Irf9Q61179 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Irf9Q61179 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
Irf9Q61179 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.65■■■□□ 2.66
Irf9Q61179 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC31.64■■■□□ 2.66
Irf9Q61179 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Irf9Q61179 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Irf9Q61179 AC157572.2-201ENSMUST00000226970 908 ntBASIC31.61■■■□□ 2.65
Irf9Q61179 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Irf9Q61179 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Irf9Q61179 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Irf9Q61179 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.58■■■□□ 2.65
Irf9Q61179 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms