Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25,74■■□□□ 1,71
Sdf4Q61112 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25,73■■□□□ 1,71
Sdf4Q61112 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25,73■■□□□ 1,71
Sdf4Q61112 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25,73■■□□□ 1,71
Sdf4Q61112 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25,71■■□□□ 1,71
Sdf4Q61112 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25,7■■□□□ 1,7
Sdf4Q61112 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25,7■■□□□ 1,7
Sdf4Q61112 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25,68■■□□□ 1,7
Sdf4Q61112 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25,67■■□□□ 1,7
Sdf4Q61112 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25,67■■□□□ 1,7
Sdf4Q61112 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25,67■■□□□ 1,7
Sdf4Q61112 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25,65■■□□□ 1,7
Sdf4Q61112 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25,63■■□□□ 1,69
Sdf4Q61112 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25,62■■□□□ 1,69
Sdf4Q61112 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25,61■■□□□ 1,69
Sdf4Q61112 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25,61■■□□□ 1,69
Sdf4Q61112 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25,6■■□□□ 1,69
Sdf4Q61112 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25,59■■□□□ 1,69
Sdf4Q61112 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25,59■■□□□ 1,69
Sdf4Q61112 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25,57■■□□□ 1,68
Sdf4Q61112 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25,56■■□□□ 1,68
Sdf4Q61112 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25,56■■□□□ 1,68
Sdf4Q61112 Gm30346-201ENSMUST00000218641 1699 ntBASIC25,55■■□□□ 1,68
Sdf4Q61112 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25,54■■□□□ 1,68
Sdf4Q61112 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25,54■■□□□ 1,68
Sdf4Q61112 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25,54■■□□□ 1,68
Sdf4Q61112 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25,54■■□□□ 1,68
Sdf4Q61112 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25,53■■□□□ 1,68
Sdf4Q61112 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25,52■■□□□ 1,68
Sdf4Q61112 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25,52■■□□□ 1,68
Sdf4Q61112 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25,52■■□□□ 1,68
Sdf4Q61112 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25,51■■□□□ 1,67
Sdf4Q61112 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25,49■■□□□ 1,67
Sdf4Q61112 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25,48■■□□□ 1,67
Sdf4Q61112 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25,48■■□□□ 1,67
Sdf4Q61112 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25,48■■□□□ 1,67
Sdf4Q61112 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25,47■■□□□ 1,67
Sdf4Q61112 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25,47■■□□□ 1,67
Sdf4Q61112 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25,46■■□□□ 1,67
Sdf4Q61112 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Sdf4Q61112 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25,44■■□□□ 1,66
Sdf4Q61112 Gm6345-201ENSMUST00000180378 1691 ntBASIC25,44■■□□□ 1,66
Sdf4Q61112 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25,43■■□□□ 1,66
Sdf4Q61112 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25,43■■□□□ 1,66
Sdf4Q61112 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25,42■■□□□ 1,66
Sdf4Q61112 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25,42■■□□□ 1,66
Sdf4Q61112 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25,42■■□□□ 1,66
Sdf4Q61112 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Sdf4Q61112 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Sdf4Q61112 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25,41■■□□□ 1,66
Sdf4Q61112 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Sdf4Q61112 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Sdf4Q61112 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25,39■■□□□ 1,65
Sdf4Q61112 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25,38■■□□□ 1,65
Sdf4Q61112 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25,38■■□□□ 1,65
Sdf4Q61112 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Sdf4Q61112 Zfp131-205ENSMUST00000223812 663 ntBASIC25,36■■□□□ 1,65
Sdf4Q61112 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25,36■■□□□ 1,65
Sdf4Q61112 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25,35■■□□□ 1,65
Sdf4Q61112 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25,35■■□□□ 1,65
Sdf4Q61112 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25,34■■□□□ 1,65
Sdf4Q61112 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25,34■■□□□ 1,65
Sdf4Q61112 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25,34■■□□□ 1,65
Sdf4Q61112 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25,34■■□□□ 1,65
Sdf4Q61112 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25,33■■□□□ 1,65
Sdf4Q61112 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25,32■■□□□ 1,64
Sdf4Q61112 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25,3■■□□□ 1,64
Sdf4Q61112 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25,3■■□□□ 1,64
Sdf4Q61112 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Sdf4Q61112 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Sdf4Q61112 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25,28■■□□□ 1,64
Sdf4Q61112 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25,28■■□□□ 1,64
Sdf4Q61112 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Sdf4Q61112 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25,25■■□□□ 1,63
Sdf4Q61112 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25,25■■□□□ 1,63
Sdf4Q61112 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25,25■■□□□ 1,63
Sdf4Q61112 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25,24■■□□□ 1,63
Sdf4Q61112 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25,24■■□□□ 1,63
Sdf4Q61112 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25,24■■□□□ 1,63
Sdf4Q61112 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25,24■■□□□ 1,63
Sdf4Q61112 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25,23■■□□□ 1,63
Sdf4Q61112 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25,23■■□□□ 1,63
Sdf4Q61112 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25,23■■□□□ 1,63
Sdf4Q61112 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25,22■■□□□ 1,63
Sdf4Q61112 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25,22■■□□□ 1,63
Sdf4Q61112 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25,21■■□□□ 1,63
Sdf4Q61112 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Sdf4Q61112 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25,2■■□□□ 1,63
Sdf4Q61112 Zxda-201ENSMUST00000117281 2621 ntBASIC25,2■■□□□ 1,62
Sdf4Q61112 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25,2■■□□□ 1,62
Sdf4Q61112 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25,18■■□□□ 1,62
Sdf4Q61112 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25,18■■□□□ 1,62
Sdf4Q61112 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25,18■■□□□ 1,62
Sdf4Q61112 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25,18■■□□□ 1,62
Sdf4Q61112 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25,17■■□□□ 1,62
Sdf4Q61112 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25,17■■□□□ 1,62
Sdf4Q61112 Tdp2-203ENSMUST00000223804 1136 ntBASIC25,17■■□□□ 1,62
Sdf4Q61112 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Sdf4Q61112 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25,16■■□□□ 1,62
Sdf4Q61112 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Retrieved 100 of 76,532 protein–RNA pairs in 19,5 ms