Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC32.61■■■□□ 2.81
Ubr3Q5U430 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC32.61■■■□□ 2.81
Ubr3Q5U430 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Ubr3Q5U430 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC32.59■■■□□ 2.81
Ubr3Q5U430 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC32.59■■■□□ 2.81
Ubr3Q5U430 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32.58■■■□□ 2.81
Ubr3Q5U430 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Ubr3Q5U430 Gm6821-201ENSMUST00000107540 542 ntBASIC32.56■■■□□ 2.8
Ubr3Q5U430 Gm43863-201ENSMUST00000203822 1192 ntBASIC32.53■■■□□ 2.8
Ubr3Q5U430 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ubr3Q5U430 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ubr3Q5U430 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Ubr3Q5U430 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Ubr3Q5U430 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC32.5■■■□□ 2.79
Ubr3Q5U430 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ubr3Q5U430 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Ubr3Q5U430 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC32.48■■■□□ 2.79
Ubr3Q5U430 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ubr3Q5U430 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ubr3Q5U430 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Ubr3Q5U430 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Ubr3Q5U430 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Ubr3Q5U430 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ubr3Q5U430 AC157572.2-201ENSMUST00000226970 908 ntBASIC32.4■■■□□ 2.78
Ubr3Q5U430 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ubr3Q5U430 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Ubr3Q5U430 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
Ubr3Q5U430 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ubr3Q5U430 Gm42809-201ENSMUST00000198429 1138 ntBASIC32.36■■■□□ 2.77
Ubr3Q5U430 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
Ubr3Q5U430 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ubr3Q5U430 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.77
Ubr3Q5U430 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
Ubr3Q5U430 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Ubr3Q5U430 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Ubr3Q5U430 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ubr3Q5U430 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC32.27■■■□□ 2.76
Ubr3Q5U430 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
Ubr3Q5U430 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ubr3Q5U430 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC32.25■■■□□ 2.75
Ubr3Q5U430 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ubr3Q5U430 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
Ubr3Q5U430 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC32.22■■■□□ 2.75
Ubr3Q5U430 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Ubr3Q5U430 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Ubr3Q5U430 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
Ubr3Q5U430 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Ubr3Q5U430 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Ubr3Q5U430 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC32.12■■■□□ 2.73
Ubr3Q5U430 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Ubr3Q5U430 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Ubr3Q5U430 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC32.11■■■□□ 2.73
Ubr3Q5U430 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Ubr3Q5U430 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ubr3Q5U430 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
Ubr3Q5U430 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Ubr3Q5U430 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Ubr3Q5U430 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
Ubr3Q5U430 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ubr3Q5U430 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ubr3Q5U430 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Ubr3Q5U430 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC32.02■■■□□ 2.72
Ubr3Q5U430 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
Ubr3Q5U430 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Ubr3Q5U430 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Ubr3Q5U430 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32■■■□□ 2.71
Ubr3Q5U430 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.98■■■□□ 2.71
Ubr3Q5U430 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.98■■■□□ 2.71
Ubr3Q5U430 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ubr3Q5U430 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Ubr3Q5U430 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.95■■■□□ 2.71
Ubr3Q5U430 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
Ubr3Q5U430 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31.95■■■□□ 2.7
Ubr3Q5U430 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
Ubr3Q5U430 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.94■■■□□ 2.7
Ubr3Q5U430 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.9■■■□□ 2.7
Ubr3Q5U430 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.9■■■□□ 2.7
Ubr3Q5U430 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.9■■■□□ 2.7
Ubr3Q5U430 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ubr3Q5U430 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Ubr3Q5U430 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ubr3Q5U430 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ubr3Q5U430 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ubr3Q5U430 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
Ubr3Q5U430 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.88■■■□□ 2.69
Ubr3Q5U430 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.88■■■□□ 2.69
Ubr3Q5U430 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.86■■■□□ 2.69
Ubr3Q5U430 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ubr3Q5U430 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ubr3Q5U430 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.85■■■□□ 2.69
Ubr3Q5U430 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
Ubr3Q5U430 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ubr3Q5U430 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ubr3Q5U430 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ubr3Q5U430 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ubr3Q5U430 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ubr3Q5U430 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ubr3Q5U430 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
Ubr3Q5U430 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Ubr3Q5U430 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms