Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20,28■□□□□ 0,84
Trav2Q5R1I9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20,27■□□□□ 0,83
Trav2Q5R1I9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20,26■□□□□ 0,83
Trav2Q5R1I9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20,26■□□□□ 0,83
Trav2Q5R1I9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20,26■□□□□ 0,83
Trav2Q5R1I9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20,25■□□□□ 0,83
Trav2Q5R1I9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20,25■□□□□ 0,83
Trav2Q5R1I9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20,25■□□□□ 0,83
Trav2Q5R1I9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20,25■□□□□ 0,83
Trav2Q5R1I9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20,25■□□□□ 0,83
Trav2Q5R1I9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20,25■□□□□ 0,83
Trav2Q5R1I9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20,24■□□□□ 0,83
Trav2Q5R1I9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20,23■□□□□ 0,83
Trav2Q5R1I9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20,23■□□□□ 0,83
Trav2Q5R1I9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20,23■□□□□ 0,83
Trav2Q5R1I9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20,22■□□□□ 0,83
Trav2Q5R1I9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20,22■□□□□ 0,83
Trav2Q5R1I9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20,21■□□□□ 0,83
Trav2Q5R1I9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20,21■□□□□ 0,83
Trav2Q5R1I9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20,21■□□□□ 0,83
Trav2Q5R1I9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20,2■□□□□ 0,82
Trav2Q5R1I9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20,2■□□□□ 0,82
Trav2Q5R1I9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20,2■□□□□ 0,82
Trav2Q5R1I9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20,19■□□□□ 0,82
Trav2Q5R1I9 Gm6658-202ENSMUST00000209493 1885 ntBASIC20,18■□□□□ 0,82
Trav2Q5R1I9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20,18■□□□□ 0,82
Trav2Q5R1I9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20,18■□□□□ 0,82
Trav2Q5R1I9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20,17■□□□□ 0,82
Trav2Q5R1I9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20,16■□□□□ 0,82
Trav2Q5R1I9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20,16■□□□□ 0,82
Trav2Q5R1I9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20,16■□□□□ 0,82
Trav2Q5R1I9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20,16■□□□□ 0,82
Trav2Q5R1I9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20,15■□□□□ 0,82
Trav2Q5R1I9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20,14■□□□□ 0,81
Trav2Q5R1I9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20,14■□□□□ 0,81
Trav2Q5R1I9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20,14■□□□□ 0,81
Trav2Q5R1I9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20,14■□□□□ 0,81
Trav2Q5R1I9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20,14■□□□□ 0,81
Trav2Q5R1I9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20,12■□□□□ 0,81
Trav2Q5R1I9 Gm24970-201ENSMUST00000175582 82 ntBASIC20,12■□□□□ 0,81
Trav2Q5R1I9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20,12■□□□□ 0,81
Trav2Q5R1I9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20,12■□□□□ 0,81
Trav2Q5R1I9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20,11■□□□□ 0,81
Trav2Q5R1I9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20,11■□□□□ 0,81
Trav2Q5R1I9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20,1■□□□□ 0,81
Trav2Q5R1I9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20,1■□□□□ 0,81
Trav2Q5R1I9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20,1■□□□□ 0,81
Trav2Q5R1I9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20,1■□□□□ 0,81
Trav2Q5R1I9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20,09■□□□□ 0,81
Trav2Q5R1I9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20,09■□□□□ 0,81
Trav2Q5R1I9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20,07■□□□□ 0,8
Trav2Q5R1I9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20,06■□□□□ 0,8
Trav2Q5R1I9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20,06■□□□□ 0,8
Trav2Q5R1I9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20,05■□□□□ 0,8
Trav2Q5R1I9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20,05■□□□□ 0,8
Trav2Q5R1I9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20,05■□□□□ 0,8
Trav2Q5R1I9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20,04■□□□□ 0,8
Trav2Q5R1I9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20,04■□□□□ 0,8
Trav2Q5R1I9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20,03■□□□□ 0,8
Trav2Q5R1I9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20,03■□□□□ 0,8
Trav2Q5R1I9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20,03■□□□□ 0,8
Trav2Q5R1I9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20,03■□□□□ 0,8
Trav2Q5R1I9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20,01■□□□□ 0,79
Trav2Q5R1I9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20,01■□□□□ 0,79
Trav2Q5R1I9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20■□□□□ 0,79
Trav2Q5R1I9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0,79
Trav2Q5R1I9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20■□□□□ 0,79
Trav2Q5R1I9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0,79
Trav2Q5R1I9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19,99■□□□□ 0,79
Trav2Q5R1I9 Gm43863-201ENSMUST00000203822 1192 ntBASIC19,99■□□□□ 0,79
Trav2Q5R1I9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19,97■□□□□ 0,79
Trav2Q5R1I9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19,97■□□□□ 0,79
Trav2Q5R1I9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19,96■□□□□ 0,79
Trav2Q5R1I9 Gm30346-201ENSMUST00000218641 1699 ntBASIC19,96■□□□□ 0,79
Trav2Q5R1I9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19,96■□□□□ 0,79
Trav2Q5R1I9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19,95■□□□□ 0,78
Trav2Q5R1I9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19,95■□□□□ 0,78
Trav2Q5R1I9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19,94■□□□□ 0,78
Trav2Q5R1I9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19,94■□□□□ 0,78
Trav2Q5R1I9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19,94■□□□□ 0,78
Trav2Q5R1I9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19,93■□□□□ 0,78
Trav2Q5R1I9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19,93■□□□□ 0,78
Trav2Q5R1I9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19,93■□□□□ 0,78
Trav2Q5R1I9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19,93■□□□□ 0,78
Trav2Q5R1I9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19,92■□□□□ 0,78
Trav2Q5R1I9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19,92■□□□□ 0,78
Trav2Q5R1I9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19,91■□□□□ 0,78
Trav2Q5R1I9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19,89■□□□□ 0,77
Trav2Q5R1I9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19,88■□□□□ 0,77
Trav2Q5R1I9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19,88■□□□□ 0,77
Trav2Q5R1I9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19,88■□□□□ 0,77
Trav2Q5R1I9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19,88■□□□□ 0,77
Trav2Q5R1I9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19,88■□□□□ 0,77
Trav2Q5R1I9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19,88■□□□□ 0,77
Trav2Q5R1I9 AC157572.2-201ENSMUST00000226970 908 ntBASIC19,88■□□□□ 0,77
Trav2Q5R1I9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19,87■□□□□ 0,77
Trav2Q5R1I9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19,86■□□□□ 0,77
Trav2Q5R1I9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19,83■□□□□ 0,77
Trav2Q5R1I9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19,83■□□□□ 0,77
Trav2Q5R1I9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19,83■□□□□ 0,77
Retrieved 100 of 76,532 protein–RNA pairs in 31,5 ms