Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Shisa3Q3UPR0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Shisa3Q3UPR0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.87■■□□□ 1.09
Shisa3Q3UPR0 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.86■■□□□ 1.09
Shisa3Q3UPR0 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.85■■□□□ 1.09
Shisa3Q3UPR0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Shisa3Q3UPR0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Shisa3Q3UPR0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Shisa3Q3UPR0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shisa3Q3UPR0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shisa3Q3UPR0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.82■■□□□ 1.08
Shisa3Q3UPR0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shisa3Q3UPR0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shisa3Q3UPR0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Shisa3Q3UPR0 Mipep-204ENSMUST00000225043 1548 ntBASIC21.8■■□□□ 1.08
Shisa3Q3UPR0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Shisa3Q3UPR0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Shisa3Q3UPR0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Shisa3Q3UPR0 Gm27322-201ENSMUST00000184007 104 ntBASIC21.75■■□□□ 1.07
Shisa3Q3UPR0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shisa3Q3UPR0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Shisa3Q3UPR0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shisa3Q3UPR0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.72■■□□□ 1.07
Shisa3Q3UPR0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Shisa3Q3UPR0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Shisa3Q3UPR0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Shisa3Q3UPR0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shisa3Q3UPR0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shisa3Q3UPR0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shisa3Q3UPR0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shisa3Q3UPR0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Shisa3Q3UPR0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shisa3Q3UPR0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
Shisa3Q3UPR0 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.68■■□□□ 1.06
Shisa3Q3UPR0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Shisa3Q3UPR0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shisa3Q3UPR0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Shisa3Q3UPR0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shisa3Q3UPR0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Shisa3Q3UPR0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shisa3Q3UPR0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Shisa3Q3UPR0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shisa3Q3UPR0 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.65■■□□□ 1.06
Shisa3Q3UPR0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shisa3Q3UPR0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shisa3Q3UPR0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.64■■□□□ 1.06
Shisa3Q3UPR0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Shisa3Q3UPR0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shisa3Q3UPR0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shisa3Q3UPR0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
Shisa3Q3UPR0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.63■■□□□ 1.05
Shisa3Q3UPR0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.63■■□□□ 1.05
Shisa3Q3UPR0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shisa3Q3UPR0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.62■■□□□ 1.05
Shisa3Q3UPR0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shisa3Q3UPR0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Shisa3Q3UPR0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shisa3Q3UPR0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shisa3Q3UPR0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shisa3Q3UPR0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Shisa3Q3UPR0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Shisa3Q3UPR0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Shisa3Q3UPR0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Shisa3Q3UPR0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Shisa3Q3UPR0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.57■■□□□ 1.04
Shisa3Q3UPR0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shisa3Q3UPR0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shisa3Q3UPR0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.56■■□□□ 1.04
Shisa3Q3UPR0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Shisa3Q3UPR0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shisa3Q3UPR0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Shisa3Q3UPR0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shisa3Q3UPR0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shisa3Q3UPR0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Shisa3Q3UPR0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Shisa3Q3UPR0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Shisa3Q3UPR0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Shisa3Q3UPR0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Shisa3Q3UPR0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.49■■□□□ 1.03
Shisa3Q3UPR0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Shisa3Q3UPR0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Shisa3Q3UPR0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Shisa3Q3UPR0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.47■■□□□ 1.03
Shisa3Q3UPR0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shisa3Q3UPR0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Shisa3Q3UPR0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shisa3Q3UPR0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Shisa3Q3UPR0 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.46■■□□□ 1.03
Shisa3Q3UPR0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Shisa3Q3UPR0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Shisa3Q3UPR0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Shisa3Q3UPR0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Shisa3Q3UPR0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Shisa3Q3UPR0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shisa3Q3UPR0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shisa3Q3UPR0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shisa3Q3UPR0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Shisa3Q3UPR0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Shisa3Q3UPR0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shisa3Q3UPR0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms