Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pdlim4P70271 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Pdlim4P70271 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Pdlim4P70271 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.87■□□□□ 0.93
Pdlim4P70271 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim4P70271 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Pdlim4P70271 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim4P70271 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim4P70271 Zxda-201ENSMUST00000117281 2621 ntBASIC20.84■□□□□ 0.93
Pdlim4P70271 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim4P70271 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim4P70271 Zfp131-205ENSMUST00000223812 663 ntBASIC20.83■□□□□ 0.93
Pdlim4P70271 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pdlim4P70271 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim4P70271 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim4P70271 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim4P70271 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim4P70271 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.79■□□□□ 0.92
Pdlim4P70271 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pdlim4P70271 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.79■□□□□ 0.92
Pdlim4P70271 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pdlim4P70271 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pdlim4P70271 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdlim4P70271 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdlim4P70271 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pdlim4P70271 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Pdlim4P70271 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Pdlim4P70271 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdlim4P70271 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdlim4P70271 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim4P70271 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim4P70271 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.73■□□□□ 0.91
Pdlim4P70271 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim4P70271 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pdlim4P70271 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim4P70271 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim4P70271 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pdlim4P70271 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdlim4P70271 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdlim4P70271 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.7■□□□□ 0.9
Pdlim4P70271 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdlim4P70271 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdlim4P70271 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim4P70271 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.68■□□□□ 0.9
Pdlim4P70271 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim4P70271 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim4P70271 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pdlim4P70271 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdlim4P70271 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdlim4P70271 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdlim4P70271 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pdlim4P70271 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pdlim4P70271 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pdlim4P70271 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdlim4P70271 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim4P70271 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.62■□□□□ 0.89
Pdlim4P70271 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim4P70271 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Pdlim4P70271 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim4P70271 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim4P70271 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.61■□□□□ 0.89
Pdlim4P70271 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdlim4P70271 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pdlim4P70271 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.61■□□□□ 0.89
Pdlim4P70271 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pdlim4P70271 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pdlim4P70271 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.6■□□□□ 0.89
Pdlim4P70271 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdlim4P70271 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdlim4P70271 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdlim4P70271 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pdlim4P70271 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pdlim4P70271 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Pdlim4P70271 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Pdlim4P70271 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Pdlim4P70271 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdlim4P70271 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim4P70271 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim4P70271 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pdlim4P70271 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim4P70271 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim4P70271 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.53■□□□□ 0.88
Pdlim4P70271 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim4P70271 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim4P70271 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim4P70271 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim4P70271 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim4P70271 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim4P70271 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim4P70271 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim4P70271 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim4P70271 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim4P70271 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pdlim4P70271 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.45■□□□□ 0.86
Pdlim4P70271 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Pdlim4P70271 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.45■□□□□ 0.86
Pdlim4P70271 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim4P70271 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim4P70271 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.44■□□□□ 0.86
Pdlim4P70271 Gm45855-201ENSMUST00000212546 880 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms