Protein–RNA interactions for Protein: P62823

Rab3c, Ras-related protein Rab-3C, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3cP62823 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rab3cP62823 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab3cP62823 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab3cP62823 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab3cP62823 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rab3cP62823 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
Rab3cP62823 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.32■■□□□ 1
Rab3cP62823 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rab3cP62823 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Rab3cP62823 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rab3cP62823 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rab3cP62823 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rab3cP62823 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rab3cP62823 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rab3cP62823 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rab3cP62823 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab3cP62823 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab3cP62823 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab3cP62823 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rab3cP62823 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rab3cP62823 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Rab3cP62823 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Rab3cP62823 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.22■□□□□ 0.99
Rab3cP62823 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.21■□□□□ 0.99
Rab3cP62823 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Rab3cP62823 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rab3cP62823 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rab3cP62823 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Rab3cP62823 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.18■□□□□ 0.98
Rab3cP62823 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rab3cP62823 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab3cP62823 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rab3cP62823 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab3cP62823 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rab3cP62823 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rab3cP62823 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rab3cP62823 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab3cP62823 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Rab3cP62823 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rab3cP62823 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.15■□□□□ 0.98
Rab3cP62823 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.15■□□□□ 0.98
Rab3cP62823 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rab3cP62823 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.13■□□□□ 0.97
Rab3cP62823 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rab3cP62823 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rab3cP62823 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rab3cP62823 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rab3cP62823 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rab3cP62823 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rab3cP62823 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rab3cP62823 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rab3cP62823 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rab3cP62823 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rab3cP62823 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rab3cP62823 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rab3cP62823 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.07■□□□□ 0.96
Rab3cP62823 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.07■□□□□ 0.96
Rab3cP62823 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab3cP62823 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rab3cP62823 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.06■□□□□ 0.96
Rab3cP62823 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab3cP62823 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rab3cP62823 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rab3cP62823 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab3cP62823 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.04■□□□□ 0.96
Rab3cP62823 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab3cP62823 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab3cP62823 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab3cP62823 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab3cP62823 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rab3cP62823 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Rab3cP62823 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab3cP62823 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Rab3cP62823 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.02■□□□□ 0.96
Rab3cP62823 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
Rab3cP62823 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rab3cP62823 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab3cP62823 Gm25262-201ENSMUST00000174934 133 ntBASIC21.01■□□□□ 0.95
Rab3cP62823 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.01■□□□□ 0.95
Rab3cP62823 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab3cP62823 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rab3cP62823 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Rab3cP62823 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab3cP62823 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab3cP62823 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab3cP62823 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rab3cP62823 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab3cP62823 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rab3cP62823 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab3cP62823 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab3cP62823 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab3cP62823 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab3cP62823 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Rab3cP62823 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab3cP62823 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.95■□□□□ 0.94
Rab3cP62823 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab3cP62823 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.93■□□□□ 0.94
Rab3cP62823 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rab3cP62823 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rab3cP62823 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms