Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Tm6sf1P58749 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Tm6sf1P58749 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Tm6sf1P58749 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Tm6sf1P58749 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Tm6sf1P58749 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
Tm6sf1P58749 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.77■■■□□ 2.68
Tm6sf1P58749 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.76■■■□□ 2.67
Tm6sf1P58749 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Tm6sf1P58749 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Tm6sf1P58749 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.75■■■□□ 2.67
Tm6sf1P58749 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Tm6sf1P58749 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Tm6sf1P58749 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
Tm6sf1P58749 Gm16148-201ENSMUST00000119653 893 ntBASIC31.7■■■□□ 2.67
Tm6sf1P58749 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
Tm6sf1P58749 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.69■■■□□ 2.66
Tm6sf1P58749 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Tm6sf1P58749 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Tm6sf1P58749 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Tm6sf1P58749 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Tm6sf1P58749 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Tm6sf1P58749 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
Tm6sf1P58749 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Tm6sf1P58749 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Tm6sf1P58749 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
Tm6sf1P58749 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Tm6sf1P58749 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.56■■■□□ 2.64
Tm6sf1P58749 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Tm6sf1P58749 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
Tm6sf1P58749 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tm6sf1P58749 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tm6sf1P58749 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tm6sf1P58749 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Tm6sf1P58749 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Tm6sf1P58749 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
Tm6sf1P58749 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Tm6sf1P58749 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Tm6sf1P58749 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.49■■■□□ 2.63
Tm6sf1P58749 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Tm6sf1P58749 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
Tm6sf1P58749 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Tm6sf1P58749 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Tm6sf1P58749 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Tm6sf1P58749 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
Tm6sf1P58749 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
Tm6sf1P58749 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.43■■■□□ 2.62
Tm6sf1P58749 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Tm6sf1P58749 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.42■■■□□ 2.62
Tm6sf1P58749 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Tm6sf1P58749 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Tm6sf1P58749 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Tm6sf1P58749 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Tm6sf1P58749 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Tm6sf1P58749 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Tm6sf1P58749 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Tm6sf1P58749 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Tm6sf1P58749 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Tm6sf1P58749 Zxda-201ENSMUST00000117281 2621 ntBASIC31.33■■■□□ 2.61
Tm6sf1P58749 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Tm6sf1P58749 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
Tm6sf1P58749 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Tm6sf1P58749 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
Tm6sf1P58749 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Tm6sf1P58749 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Tm6sf1P58749 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.27■■■□□ 2.6
Tm6sf1P58749 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC31.27■■■□□ 2.6
Tm6sf1P58749 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Tm6sf1P58749 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Tm6sf1P58749 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Tm6sf1P58749 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Tm6sf1P58749 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
Tm6sf1P58749 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Tm6sf1P58749 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Tm6sf1P58749 Zfp131-205ENSMUST00000223812 663 ntBASIC31.21■■■□□ 2.59
Tm6sf1P58749 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Tm6sf1P58749 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
Tm6sf1P58749 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Tm6sf1P58749 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Tm6sf1P58749 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.17■■■□□ 2.58
Tm6sf1P58749 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Tm6sf1P58749 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Tm6sf1P58749 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Tm6sf1P58749 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Tm6sf1P58749 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Tm6sf1P58749 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Tm6sf1P58749 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
Tm6sf1P58749 Gm43445-201ENSMUST00000198564 2091 ntBASIC31.12■■■□□ 2.57
Tm6sf1P58749 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Tm6sf1P58749 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Tm6sf1P58749 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.11■■■□□ 2.57
Tm6sf1P58749 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Tm6sf1P58749 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Tm6sf1P58749 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
Tm6sf1P58749 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Tm6sf1P58749 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Tm6sf1P58749 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Tm6sf1P58749 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Tm6sf1P58749 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Tm6sf1P58749 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms