Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24,39■■□□□ 1,49
Cdkn2bP55271 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24,39■■□□□ 1,49
Cdkn2bP55271 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24,39■■□□□ 1,49
Cdkn2bP55271 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24,39■■□□□ 1,49
Cdkn2bP55271 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24,38■■□□□ 1,49
Cdkn2bP55271 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24,37■■□□□ 1,49
Cdkn2bP55271 Gm27322-201ENSMUST00000184007 104 ntBASIC24,37■■□□□ 1,49
Cdkn2bP55271 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24,37■■□□□ 1,49
Cdkn2bP55271 Amer2-203ENSMUST00000225247 2662 ntBASIC24,36■■□□□ 1,49
Cdkn2bP55271 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24,35■■□□□ 1,49
Cdkn2bP55271 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24,35■■□□□ 1,49
Cdkn2bP55271 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24,35■■□□□ 1,49
Cdkn2bP55271 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24,34■■□□□ 1,49
Cdkn2bP55271 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24,34■■□□□ 1,49
Cdkn2bP55271 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24,33■■□□□ 1,49
Cdkn2bP55271 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24,32■■□□□ 1,48
Cdkn2bP55271 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24,32■■□□□ 1,48
Cdkn2bP55271 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24,32■■□□□ 1,48
Cdkn2bP55271 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24,31■■□□□ 1,48
Cdkn2bP55271 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24,3■■□□□ 1,48
Cdkn2bP55271 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24,3■■□□□ 1,48
Cdkn2bP55271 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24,3■■□□□ 1,48
Cdkn2bP55271 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24,3■■□□□ 1,48
Cdkn2bP55271 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24,29■■□□□ 1,48
Cdkn2bP55271 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24,29■■□□□ 1,48
Cdkn2bP55271 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24,29■■□□□ 1,48
Cdkn2bP55271 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24,27■■□□□ 1,48
Cdkn2bP55271 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24,26■■□□□ 1,47
Cdkn2bP55271 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24,26■■□□□ 1,47
Cdkn2bP55271 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24,26■■□□□ 1,47
Cdkn2bP55271 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24,26■■□□□ 1,47
Cdkn2bP55271 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24,24■■□□□ 1,47
Cdkn2bP55271 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24,24■■□□□ 1,47
Cdkn2bP55271 Gm30346-201ENSMUST00000218641 1699 ntBASIC24,23■■□□□ 1,47
Cdkn2bP55271 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24,22■■□□□ 1,47
Cdkn2bP55271 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24,22■■□□□ 1,47
Cdkn2bP55271 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24,21■■□□□ 1,47
Cdkn2bP55271 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24,21■■□□□ 1,47
Cdkn2bP55271 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24,21■■□□□ 1,47
Cdkn2bP55271 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24,21■■□□□ 1,47
Cdkn2bP55271 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24,2■■□□□ 1,47
Cdkn2bP55271 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24,2■■□□□ 1,46
Cdkn2bP55271 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24,19■■□□□ 1,46
Cdkn2bP55271 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
Cdkn2bP55271 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24,17■■□□□ 1,46
Cdkn2bP55271 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24,17■■□□□ 1,46
Cdkn2bP55271 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24,17■■□□□ 1,46
Cdkn2bP55271 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24,17■■□□□ 1,46
Cdkn2bP55271 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24,16■■□□□ 1,46
Cdkn2bP55271 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24,15■■□□□ 1,46
Cdkn2bP55271 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24,15■■□□□ 1,46
Cdkn2bP55271 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24,15■■□□□ 1,46
Cdkn2bP55271 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24,14■■□□□ 1,46
Cdkn2bP55271 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24,13■■□□□ 1,45
Cdkn2bP55271 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24,13■■□□□ 1,45
Cdkn2bP55271 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24,12■■□□□ 1,45
Cdkn2bP55271 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24,11■■□□□ 1,45
Cdkn2bP55271 Fezf2-202ENSMUST00000224023 1917 ntBASIC24,11■■□□□ 1,45
Cdkn2bP55271 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24,1■■□□□ 1,45
Cdkn2bP55271 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24,1■■□□□ 1,45
Cdkn2bP55271 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24,09■■□□□ 1,45
Cdkn2bP55271 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24,09■■□□□ 1,45
Cdkn2bP55271 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24,09■■□□□ 1,45
Cdkn2bP55271 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24,09■■□□□ 1,45
Cdkn2bP55271 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24,09■■□□□ 1,45
Cdkn2bP55271 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24,09■■□□□ 1,45
Cdkn2bP55271 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24,09■■□□□ 1,45
Cdkn2bP55271 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24,06■■□□□ 1,44
Cdkn2bP55271 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24,05■■□□□ 1,44
Cdkn2bP55271 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24,05■■□□□ 1,44
Cdkn2bP55271 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24,05■■□□□ 1,44
Cdkn2bP55271 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24,04■■□□□ 1,44
Cdkn2bP55271 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24,03■■□□□ 1,44
Cdkn2bP55271 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24,03■■□□□ 1,44
Cdkn2bP55271 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24,01■■□□□ 1,43
Cdkn2bP55271 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24,01■■□□□ 1,43
Cdkn2bP55271 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23,98■■□□□ 1,43
Cdkn2bP55271 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23,98■■□□□ 1,43
Cdkn2bP55271 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23,97■■□□□ 1,43
Cdkn2bP55271 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23,97■■□□□ 1,43
Cdkn2bP55271 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23,97■■□□□ 1,43
Cdkn2bP55271 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23,97■■□□□ 1,43
Cdkn2bP55271 Peli2-204ENSMUST00000226513 1320 ntBASIC23,96■■□□□ 1,43
Cdkn2bP55271 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23,96■■□□□ 1,43
Cdkn2bP55271 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23,96■■□□□ 1,43
Cdkn2bP55271 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23,95■■□□□ 1,42
Cdkn2bP55271 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23,95■■□□□ 1,42
Cdkn2bP55271 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23,95■■□□□ 1,42
Cdkn2bP55271 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23,95■■□□□ 1,42
Cdkn2bP55271 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23,94■■□□□ 1,42
Cdkn2bP55271 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23,93■■□□□ 1,42
Cdkn2bP55271 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23,93■■□□□ 1,42
Cdkn2bP55271 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23,93■■□□□ 1,42
Cdkn2bP55271 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23,92■■□□□ 1,42
Cdkn2bP55271 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23,92■■□□□ 1,42
Cdkn2bP55271 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23,91■■□□□ 1,42
Cdkn2bP55271 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23,91■■□□□ 1,42
Cdkn2bP55271 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23,9■■□□□ 1,42
Cdkn2bP55271 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23,9■■□□□ 1,42
Cdkn2bP55271 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23,9■■□□□ 1,42
Retrieved 100 of 76,532 protein–RNA pairs in 38,3 ms