Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27,05■■□□□ 1,92
Sox1P53783 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27,05■■□□□ 1,92
Sox1P53783 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27,05■■□□□ 1,92
Sox1P53783 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27,05■■□□□ 1,92
Sox1P53783 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27,04■■□□□ 1,92
Sox1P53783 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27,04■■□□□ 1,92
Sox1P53783 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27,04■■□□□ 1,92
Sox1P53783 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27,03■■□□□ 1,92
Sox1P53783 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27,02■■□□□ 1,92
Sox1P53783 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27,01■■□□□ 1,91
Sox1P53783 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC27■■□□□ 1,91
Sox1P53783 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27■■□□□ 1,91
Sox1P53783 Gm11175-201ENSMUST00000116172 543 ntBASIC26,99■■□□□ 1,91
Sox1P53783 Mir6538-201ENSMUST00000183713 110 ntBASIC26,99■■□□□ 1,91
Sox1P53783 Gm43863-201ENSMUST00000203822 1192 ntBASIC26,99■■□□□ 1,91
Sox1P53783 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26,99■■□□□ 1,91
Sox1P53783 Cap2-205ENSMUST00000225824 1634 ntBASIC26,98■■□□□ 1,91
Sox1P53783 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26,98■■□□□ 1,91
Sox1P53783 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26,97■■□□□ 1,91
Sox1P53783 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26,97■■□□□ 1,91
Sox1P53783 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26,97■■□□□ 1,91
Sox1P53783 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26,97■■□□□ 1,91
Sox1P53783 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26,96■■□□□ 1,91
Sox1P53783 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26,96■■□□□ 1,91
Sox1P53783 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26,96■■□□□ 1,91
Sox1P53783 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26,96■■□□□ 1,91
Sox1P53783 Gm7432-201ENSMUST00000210343 879 ntBASIC26,95■■□□□ 1,9
Sox1P53783 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26,94■■□□□ 1,9
Sox1P53783 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26,91■■□□□ 1,9
Sox1P53783 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26,9■■□□□ 1,9
Sox1P53783 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26,9■■□□□ 1,9
Sox1P53783 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26,89■■□□□ 1,89
Sox1P53783 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26,88■■□□□ 1,89
Sox1P53783 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26,88■■□□□ 1,89
Sox1P53783 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26,87■■□□□ 1,89
Sox1P53783 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26,87■■□□□ 1,89
Sox1P53783 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26,86■■□□□ 1,89
Sox1P53783 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26,86■■□□□ 1,89
Sox1P53783 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26,86■■□□□ 1,89
Sox1P53783 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26,85■■□□□ 1,89
Sox1P53783 Gm15039-201ENSMUST00000118914 875 ntBASIC26,85■■□□□ 1,89
Sox1P53783 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26,84■■□□□ 1,89
Sox1P53783 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26,83■■□□□ 1,89
Sox1P53783 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26,83■■□□□ 1,89
Sox1P53783 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26,82■■□□□ 1,88
Sox1P53783 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26,79■■□□□ 1,88
Sox1P53783 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26,77■■□□□ 1,88
Sox1P53783 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26,77■■□□□ 1,88
Sox1P53783 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26,77■■□□□ 1,88
Sox1P53783 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26,75■■□□□ 1,87
Sox1P53783 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26,74■■□□□ 1,87
Sox1P53783 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26,74■■□□□ 1,87
Sox1P53783 Nkain2-201ENSMUST00000092602 558 ntBASIC26,74■■□□□ 1,87
Sox1P53783 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26,73■■□□□ 1,87
Sox1P53783 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26,71■■□□□ 1,87
Sox1P53783 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26,71■■□□□ 1,87
Sox1P53783 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26,7■■□□□ 1,86
Sox1P53783 Gm11599-201ENSMUST00000118720 878 ntBASIC26,7■■□□□ 1,86
Sox1P53783 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26,69■■□□□ 1,86
Sox1P53783 AC157572.2-201ENSMUST00000226970 908 ntBASIC26,69■■□□□ 1,86
Sox1P53783 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26,69■■□□□ 1,86
Sox1P53783 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26,68■■□□□ 1,86
Sox1P53783 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26,68■■□□□ 1,86
Sox1P53783 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26,66■■□□□ 1,86
Sox1P53783 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26,65■■□□□ 1,86
Sox1P53783 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26,65■■□□□ 1,86
Sox1P53783 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26,63■■□□□ 1,85
Sox1P53783 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC26,63■■□□□ 1,85
Sox1P53783 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26,61■■□□□ 1,85
Sox1P53783 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26,61■■□□□ 1,85
Sox1P53783 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26,61■■□□□ 1,85
Sox1P53783 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26,6■■□□□ 1,85
Sox1P53783 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC26,59■■□□□ 1,85
Sox1P53783 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26,59■■□□□ 1,85
Sox1P53783 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26,58■■□□□ 1,85
Sox1P53783 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26,58■■□□□ 1,85
Sox1P53783 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26,58■■□□□ 1,85
Sox1P53783 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26,58■■□□□ 1,84
Sox1P53783 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26,57■■□□□ 1,84
Sox1P53783 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26,56■■□□□ 1,84
Sox1P53783 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26,55■■□□□ 1,84
Sox1P53783 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26,54■■□□□ 1,84
Sox1P53783 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26,52■■□□□ 1,84
Sox1P53783 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26,51■■□□□ 1,83
Sox1P53783 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26,5■■□□□ 1,83
Sox1P53783 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Sox1P53783 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Sox1P53783 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Sox1P53783 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26,48■■□□□ 1,83
Sox1P53783 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26,48■■□□□ 1,83
Sox1P53783 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26,46■■□□□ 1,83
Sox1P53783 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26,46■■□□□ 1,83
Sox1P53783 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26,42■■□□□ 1,82
Sox1P53783 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26,4■■□□□ 1,82
Sox1P53783 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26,38■■□□□ 1,81
Sox1P53783 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Sox1P53783 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26,37■■□□□ 1,81
Sox1P53783 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26,37■■□□□ 1,81
Sox1P53783 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26,37■■□□□ 1,81
Sox1P53783 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26,37■■□□□ 1,81
Retrieved 100 of 76,532 protein–RNA pairs in 33,2 ms