Protein–RNA interactions for Protein: P52800

Efnb2, Ephrin-B2, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb2P52800 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Efnb2P52800 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Efnb2P52800 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.82■□□□□ 0.92
Efnb2P52800 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Efnb2P52800 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Efnb2P52800 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Efnb2P52800 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Efnb2P52800 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.78■□□□□ 0.92
Efnb2P52800 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Efnb2P52800 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Efnb2P52800 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Efnb2P52800 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Efnb2P52800 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Efnb2P52800 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.74■□□□□ 0.91
Efnb2P52800 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.74■□□□□ 0.91
Efnb2P52800 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Efnb2P52800 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Efnb2P52800 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Efnb2P52800 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.73■□□□□ 0.91
Efnb2P52800 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Efnb2P52800 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.71■□□□□ 0.91
Efnb2P52800 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Efnb2P52800 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.7■□□□□ 0.9
Efnb2P52800 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Efnb2P52800 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Efnb2P52800 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Efnb2P52800 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Efnb2P52800 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Efnb2P52800 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Efnb2P52800 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Efnb2P52800 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Efnb2P52800 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Efnb2P52800 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Efnb2P52800 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Efnb2P52800 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Efnb2P52800 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Efnb2P52800 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Efnb2P52800 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Efnb2P52800 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Efnb2P52800 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.62■□□□□ 0.89
Efnb2P52800 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Efnb2P52800 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Efnb2P52800 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Efnb2P52800 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Efnb2P52800 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Efnb2P52800 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Efnb2P52800 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Efnb2P52800 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Efnb2P52800 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Efnb2P52800 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Efnb2P52800 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Efnb2P52800 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Efnb2P52800 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Efnb2P52800 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.56■□□□□ 0.88
Efnb2P52800 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Efnb2P52800 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Efnb2P52800 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Efnb2P52800 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Efnb2P52800 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Efnb2P52800 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Efnb2P52800 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Efnb2P52800 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Efnb2P52800 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Efnb2P52800 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Efnb2P52800 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Efnb2P52800 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Efnb2P52800 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Efnb2P52800 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Efnb2P52800 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.49■□□□□ 0.87
Efnb2P52800 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Efnb2P52800 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Efnb2P52800 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Efnb2P52800 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.48■□□□□ 0.87
Efnb2P52800 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Efnb2P52800 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Efnb2P52800 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.46■□□□□ 0.87
Efnb2P52800 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Efnb2P52800 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Efnb2P52800 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Efnb2P52800 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.45■□□□□ 0.86
Efnb2P52800 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Efnb2P52800 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Efnb2P52800 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.45■□□□□ 0.86
Efnb2P52800 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.44■□□□□ 0.86
Efnb2P52800 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Efnb2P52800 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Efnb2P52800 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Efnb2P52800 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Efnb2P52800 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Efnb2P52800 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Efnb2P52800 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Efnb2P52800 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Efnb2P52800 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Efnb2P52800 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Efnb2P52800 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Efnb2P52800 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Efnb2P52800 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
Efnb2P52800 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.41■□□□□ 0.86
Efnb2P52800 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Efnb2P52800 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms