Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Slc6a11P31650 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Slc6a11P31650 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.93■■□□□ 1.42
Slc6a11P31650 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Slc6a11P31650 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Slc6a11P31650 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Slc6a11P31650 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Slc6a11P31650 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Slc6a11P31650 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Slc6a11P31650 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Slc6a11P31650 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Slc6a11P31650 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
Slc6a11P31650 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Slc6a11P31650 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Slc6a11P31650 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Slc6a11P31650 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Slc6a11P31650 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Slc6a11P31650 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Slc6a11P31650 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
Slc6a11P31650 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Slc6a11P31650 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slc6a11P31650 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Slc6a11P31650 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Slc6a11P31650 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Slc6a11P31650 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Slc6a11P31650 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Slc6a11P31650 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Slc6a11P31650 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Slc6a11P31650 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Slc6a11P31650 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Slc6a11P31650 Amer2-203ENSMUST00000225247 2662 ntBASIC23.73■■□□□ 1.39
Slc6a11P31650 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc6a11P31650 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc6a11P31650 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc6a11P31650 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Slc6a11P31650 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Slc6a11P31650 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Slc6a11P31650 Gm16148-201ENSMUST00000119653 893 ntBASIC23.69■■□□□ 1.38
Slc6a11P31650 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
Slc6a11P31650 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.68■■□□□ 1.38
Slc6a11P31650 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Slc6a11P31650 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Slc6a11P31650 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Slc6a11P31650 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Slc6a11P31650 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Slc6a11P31650 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Slc6a11P31650 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Slc6a11P31650 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Slc6a11P31650 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Slc6a11P31650 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Slc6a11P31650 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.64■■□□□ 1.37
Slc6a11P31650 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Slc6a11P31650 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Slc6a11P31650 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Slc6a11P31650 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Slc6a11P31650 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Slc6a11P31650 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.61■■□□□ 1.37
Slc6a11P31650 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Slc6a11P31650 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Slc6a11P31650 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Slc6a11P31650 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Slc6a11P31650 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Slc6a11P31650 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Slc6a11P31650 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Slc6a11P31650 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Slc6a11P31650 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Slc6a11P31650 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.55■■□□□ 1.36
Slc6a11P31650 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Slc6a11P31650 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Slc6a11P31650 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Slc6a11P31650 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
Slc6a11P31650 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Slc6a11P31650 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.51■■□□□ 1.35
Slc6a11P31650 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.51■■□□□ 1.35
Slc6a11P31650 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Slc6a11P31650 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Slc6a11P31650 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.5■■□□□ 1.35
Slc6a11P31650 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.49■■□□□ 1.35
Slc6a11P31650 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Slc6a11P31650 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
Slc6a11P31650 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.49■■□□□ 1.35
Slc6a11P31650 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Slc6a11P31650 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Slc6a11P31650 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Slc6a11P31650 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
Slc6a11P31650 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Slc6a11P31650 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.47■■□□□ 1.35
Slc6a11P31650 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.46■■□□□ 1.35
Slc6a11P31650 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Slc6a11P31650 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Slc6a11P31650 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.44■■□□□ 1.34
Slc6a11P31650 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.44■■□□□ 1.34
Slc6a11P31650 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Slc6a11P31650 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Slc6a11P31650 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.43■■□□□ 1.34
Slc6a11P31650 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Slc6a11P31650 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Slc6a11P31650 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Slc6a11P31650 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Slc6a11P31650 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms