Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LtaP09225 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LtaP09225 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LtaP09225 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.7■□□□□ 0.9
LtaP09225 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LtaP09225 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LtaP09225 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.69■□□□□ 0.9
LtaP09225 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LtaP09225 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LtaP09225 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LtaP09225 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LtaP09225 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LtaP09225 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LtaP09225 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LtaP09225 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LtaP09225 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LtaP09225 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LtaP09225 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
LtaP09225 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LtaP09225 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LtaP09225 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LtaP09225 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LtaP09225 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LtaP09225 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LtaP09225 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LtaP09225 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LtaP09225 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LtaP09225 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LtaP09225 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LtaP09225 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LtaP09225 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LtaP09225 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LtaP09225 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LtaP09225 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.5■□□□□ 0.87
LtaP09225 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
LtaP09225 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LtaP09225 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LtaP09225 Gm45855-201ENSMUST00000212546 880 ntBASIC20.49■□□□□ 0.87
LtaP09225 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LtaP09225 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LtaP09225 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LtaP09225 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LtaP09225 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LtaP09225 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
LtaP09225 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LtaP09225 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.46■□□□□ 0.87
LtaP09225 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.46■□□□□ 0.87
LtaP09225 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.46■□□□□ 0.87
LtaP09225 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.87
LtaP09225 Gm9397-201ENSMUST00000200125 605 ntBASIC20.45■□□□□ 0.86
LtaP09225 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LtaP09225 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LtaP09225 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LtaP09225 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LtaP09225 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LtaP09225 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.42■□□□□ 0.86
LtaP09225 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LtaP09225 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
LtaP09225 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
LtaP09225 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.41■□□□□ 0.86
LtaP09225 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.4■□□□□ 0.86
LtaP09225 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LtaP09225 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LtaP09225 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LtaP09225 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LtaP09225 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LtaP09225 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LtaP09225 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LtaP09225 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.36■□□□□ 0.85
LtaP09225 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
LtaP09225 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LtaP09225 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LtaP09225 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LtaP09225 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.34■□□□□ 0.85
LtaP09225 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LtaP09225 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LtaP09225 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LtaP09225 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LtaP09225 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LtaP09225 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.32■□□□□ 0.84
LtaP09225 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LtaP09225 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LtaP09225 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LtaP09225 Gm24970-201ENSMUST00000175582 82 ntBASIC20.31■□□□□ 0.84
LtaP09225 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.31■□□□□ 0.84
LtaP09225 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LtaP09225 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LtaP09225 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.3■□□□□ 0.84
LtaP09225 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LtaP09225 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LtaP09225 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LtaP09225 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LtaP09225 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LtaP09225 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LtaP09225 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.26■□□□□ 0.83
LtaP09225 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LtaP09225 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
LtaP09225 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LtaP09225 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.25■□□□□ 0.83
LtaP09225 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms