Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC32.54■■■□□ 2.8
NeflP08551 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.54■■■□□ 2.8
NeflP08551 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
NeflP08551 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC32.51■■■□□ 2.79
NeflP08551 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.5■■■□□ 2.79
NeflP08551 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
NeflP08551 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
NeflP08551 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
NeflP08551 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
NeflP08551 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
NeflP08551 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
NeflP08551 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
NeflP08551 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
NeflP08551 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
NeflP08551 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
NeflP08551 Gm6345-201ENSMUST00000180378 1691 ntBASIC32.43■■■□□ 2.78
NeflP08551 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
NeflP08551 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
NeflP08551 Gm27322-201ENSMUST00000184007 104 ntBASIC32.39■■■□□ 2.78
NeflP08551 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
NeflP08551 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
NeflP08551 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
NeflP08551 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC32.36■■■□□ 2.77
NeflP08551 Amer2-203ENSMUST00000225247 2662 ntBASIC32.36■■■□□ 2.77
NeflP08551 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
NeflP08551 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
NeflP08551 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.34■■■□□ 2.77
NeflP08551 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
NeflP08551 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
NeflP08551 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
NeflP08551 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
NeflP08551 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
NeflP08551 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
NeflP08551 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
NeflP08551 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.3■■■□□ 2.76
NeflP08551 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.29■■■□□ 2.76
NeflP08551 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
NeflP08551 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
NeflP08551 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
NeflP08551 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC32.26■■■□□ 2.75
NeflP08551 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
NeflP08551 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC32.26■■■□□ 2.75
NeflP08551 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
NeflP08551 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
NeflP08551 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
NeflP08551 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
NeflP08551 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC32.22■■■□□ 2.75
NeflP08551 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
NeflP08551 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
NeflP08551 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC32.2■■■□□ 2.74
NeflP08551 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
NeflP08551 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
NeflP08551 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
NeflP08551 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
NeflP08551 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC32.16■■■□□ 2.74
NeflP08551 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
NeflP08551 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC32.16■■■□□ 2.74
NeflP08551 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
NeflP08551 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
NeflP08551 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC32.14■■■□□ 2.73
NeflP08551 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
NeflP08551 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
NeflP08551 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
NeflP08551 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
NeflP08551 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
NeflP08551 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
NeflP08551 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
NeflP08551 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC32.05■■■□□ 2.72
NeflP08551 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC32.05■■■□□ 2.72
NeflP08551 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
NeflP08551 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC32.04■■■□□ 2.72
NeflP08551 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
NeflP08551 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
NeflP08551 Gm30346-201ENSMUST00000218641 1699 ntBASIC32.02■■■□□ 2.72
NeflP08551 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
NeflP08551 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
NeflP08551 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
NeflP08551 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
NeflP08551 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
NeflP08551 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
NeflP08551 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
NeflP08551 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32■■■□□ 2.71
NeflP08551 Fezf2-202ENSMUST00000224023 1917 ntBASIC32■■■□□ 2.71
NeflP08551 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
NeflP08551 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC31.98■■■□□ 2.71
NeflP08551 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31.98■■■□□ 2.71
NeflP08551 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
NeflP08551 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
NeflP08551 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NeflP08551 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
NeflP08551 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
NeflP08551 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.94■■■□□ 2.7
NeflP08551 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
NeflP08551 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
NeflP08551 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC31.93■■■□□ 2.7
NeflP08551 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
NeflP08551 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NeflP08551 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NeflP08551 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
NeflP08551 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC31.9■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms