Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.59■■□□□ 1.05
H3f3cP02301 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
H3f3cP02301 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
H3f3cP02301 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
H3f3cP02301 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
H3f3cP02301 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
H3f3cP02301 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
H3f3cP02301 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
H3f3cP02301 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
H3f3cP02301 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
H3f3cP02301 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
H3f3cP02301 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
H3f3cP02301 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
H3f3cP02301 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
H3f3cP02301 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
H3f3cP02301 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.48■■□□□ 1.03
H3f3cP02301 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
H3f3cP02301 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
H3f3cP02301 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
H3f3cP02301 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
H3f3cP02301 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
H3f3cP02301 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
H3f3cP02301 Zfp131-205ENSMUST00000223812 663 ntBASIC21.46■■□□□ 1.03
H3f3cP02301 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
H3f3cP02301 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
H3f3cP02301 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
H3f3cP02301 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
H3f3cP02301 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.43■■□□□ 1.02
H3f3cP02301 Zxda-201ENSMUST00000117281 2621 ntBASIC21.43■■□□□ 1.02
H3f3cP02301 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
H3f3cP02301 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
H3f3cP02301 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.41■■□□□ 1.02
H3f3cP02301 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.41■■□□□ 1.02
H3f3cP02301 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.41■■□□□ 1.02
H3f3cP02301 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
H3f3cP02301 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
H3f3cP02301 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
H3f3cP02301 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
H3f3cP02301 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
H3f3cP02301 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
H3f3cP02301 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
H3f3cP02301 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
H3f3cP02301 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H3f3cP02301 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
H3f3cP02301 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H3f3cP02301 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
H3f3cP02301 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
H3f3cP02301 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
H3f3cP02301 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
H3f3cP02301 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
H3f3cP02301 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
H3f3cP02301 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
H3f3cP02301 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
H3f3cP02301 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
H3f3cP02301 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
H3f3cP02301 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.31■■□□□ 1
H3f3cP02301 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
H3f3cP02301 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
H3f3cP02301 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.29■■□□□ 1
H3f3cP02301 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H3f3cP02301 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
H3f3cP02301 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.27■■□□□ 1
H3f3cP02301 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.27■■□□□ 1
H3f3cP02301 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
H3f3cP02301 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
H3f3cP02301 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.25■□□□□ 0.99
H3f3cP02301 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
H3f3cP02301 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
H3f3cP02301 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.24■□□□□ 0.99
H3f3cP02301 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3f3cP02301 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3f3cP02301 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
H3f3cP02301 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H3f3cP02301 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.22■□□□□ 0.99
H3f3cP02301 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
H3f3cP02301 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
H3f3cP02301 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
H3f3cP02301 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
H3f3cP02301 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
H3f3cP02301 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.2■□□□□ 0.98
H3f3cP02301 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H3f3cP02301 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H3f3cP02301 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
H3f3cP02301 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
H3f3cP02301 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H3f3cP02301 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
H3f3cP02301 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
H3f3cP02301 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
H3f3cP02301 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3f3cP02301 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
H3f3cP02301 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
H3f3cP02301 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
H3f3cP02301 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
H3f3cP02301 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.14■□□□□ 0.98
H3f3cP02301 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
H3f3cP02301 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
H3f3cP02301 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
H3f3cP02301 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H3f3cP02301 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
H3f3cP02301 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms