Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TcraP01849 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TcraP01849 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.19■□□□□ 0.5
TcraP01849 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
TcraP01849 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TcraP01849 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TcraP01849 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TcraP01849 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TcraP01849 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TcraP01849 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TcraP01849 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TcraP01849 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TcraP01849 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TcraP01849 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.15■□□□□ 0.5
TcraP01849 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TcraP01849 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.15■□□□□ 0.5
TcraP01849 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TcraP01849 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.14■□□□□ 0.49
TcraP01849 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TcraP01849 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
TcraP01849 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TcraP01849 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TcraP01849 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TcraP01849 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TcraP01849 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TcraP01849 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TcraP01849 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TcraP01849 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TcraP01849 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.1■□□□□ 0.49
TcraP01849 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TcraP01849 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TcraP01849 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TcraP01849 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TcraP01849 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TcraP01849 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TcraP01849 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TcraP01849 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TcraP01849 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.08■□□□□ 0.48
TcraP01849 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TcraP01849 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TcraP01849 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TcraP01849 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TcraP01849 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TcraP01849 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TcraP01849 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TcraP01849 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TcraP01849 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
TcraP01849 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.01■□□□□ 0.47
TcraP01849 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.01■□□□□ 0.47
TcraP01849 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TcraP01849 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TcraP01849 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TcraP01849 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TcraP01849 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TcraP01849 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
TcraP01849 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TcraP01849 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.98■□□□□ 0.47
TcraP01849 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TcraP01849 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TcraP01849 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TcraP01849 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TcraP01849 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TcraP01849 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TcraP01849 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TcraP01849 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TcraP01849 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TcraP01849 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TcraP01849 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TcraP01849 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
TcraP01849 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
TcraP01849 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17.94■□□□□ 0.46
TcraP01849 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TcraP01849 Gm25262-201ENSMUST00000174934 133 ntBASIC17.93■□□□□ 0.46
TcraP01849 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TcraP01849 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TcraP01849 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TcraP01849 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TcraP01849 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TcraP01849 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TcraP01849 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TcraP01849 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TcraP01849 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TcraP01849 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TcraP01849 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TcraP01849 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TcraP01849 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TcraP01849 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TcraP01849 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.9■□□□□ 0.46
TcraP01849 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TcraP01849 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TcraP01849 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.89■□□□□ 0.45
TcraP01849 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TcraP01849 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TcraP01849 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TcraP01849 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.87■□□□□ 0.45
TcraP01849 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TcraP01849 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TcraP01849 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TcraP01849 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TcraP01849 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms