Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ifna1P01572 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ifna1P01572 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ifna1P01572 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.13■□□□□ 0.97
Ifna1P01572 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ifna1P01572 Gm25262-201ENSMUST00000174934 133 ntBASIC21.12■□□□□ 0.97
Ifna1P01572 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ifna1P01572 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ifna1P01572 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ifna1P01572 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ifna1P01572 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ifna1P01572 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ifna1P01572 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ifna1P01572 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ifna1P01572 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ifna1P01572 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ifna1P01572 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.06■□□□□ 0.96
Ifna1P01572 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ifna1P01572 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ifna1P01572 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ifna1P01572 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ifna1P01572 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Ifna1P01572 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ifna1P01572 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ifna1P01572 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ifna1P01572 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ifna1P01572 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ifna1P01572 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ifna1P01572 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ifna1P01572 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.01■□□□□ 0.95
Ifna1P01572 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ifna1P01572 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ifna1P01572 AC166822.3-201ENSMUST00000227394 661 ntBASIC21■□□□□ 0.95
Ifna1P01572 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ifna1P01572 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ifna1P01572 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.98■□□□□ 0.95
Ifna1P01572 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.97■□□□□ 0.95
Ifna1P01572 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ifna1P01572 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ifna1P01572 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.96■□□□□ 0.95
Ifna1P01572 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.96■□□□□ 0.95
Ifna1P01572 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.96■□□□□ 0.95
Ifna1P01572 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ifna1P01572 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ifna1P01572 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ifna1P01572 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ifna1P01572 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ifna1P01572 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.94■□□□□ 0.94
Ifna1P01572 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ifna1P01572 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ifna1P01572 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ifna1P01572 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ifna1P01572 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Ifna1P01572 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.93■□□□□ 0.94
Ifna1P01572 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
Ifna1P01572 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ifna1P01572 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ifna1P01572 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.91■□□□□ 0.94
Ifna1P01572 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ifna1P01572 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ifna1P01572 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ifna1P01572 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ifna1P01572 Gm27322-201ENSMUST00000184007 104 ntBASIC20.9■□□□□ 0.94
Ifna1P01572 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ifna1P01572 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ifna1P01572 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Ifna1P01572 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ifna1P01572 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ifna1P01572 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ifna1P01572 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ifna1P01572 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Ifna1P01572 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ifna1P01572 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ifna1P01572 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ifna1P01572 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ifna1P01572 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ifna1P01572 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.85■□□□□ 0.93
Ifna1P01572 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ifna1P01572 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ifna1P01572 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.83■□□□□ 0.92
Ifna1P01572 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ifna1P01572 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ifna1P01572 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ifna1P01572 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ifna1P01572 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.81■□□□□ 0.92
Ifna1P01572 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ifna1P01572 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.81■□□□□ 0.92
Ifna1P01572 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ifna1P01572 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ifna1P01572 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ifna1P01572 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ifna1P01572 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ifna1P01572 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ifna1P01572 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ifna1P01572 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ifna1P01572 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ifna1P01572 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ifna1P01572 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ifna1P01572 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ifna1P01572 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms