Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
DhfrP00375 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.41■■□□□ 1.18
DhfrP00375 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DhfrP00375 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
DhfrP00375 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DhfrP00375 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
DhfrP00375 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
DhfrP00375 Mipep-204ENSMUST00000225043 1548 ntBASIC22.37■■□□□ 1.17
DhfrP00375 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DhfrP00375 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DhfrP00375 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DhfrP00375 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DhfrP00375 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
DhfrP00375 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
DhfrP00375 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DhfrP00375 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DhfrP00375 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DhfrP00375 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
DhfrP00375 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DhfrP00375 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DhfrP00375 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DhfrP00375 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
DhfrP00375 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
DhfrP00375 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DhfrP00375 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DhfrP00375 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
DhfrP00375 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.25■■□□□ 1.15
DhfrP00375 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DhfrP00375 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DhfrP00375 Amer2-203ENSMUST00000225247 2662 ntBASIC22.24■■□□□ 1.15
DhfrP00375 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DhfrP00375 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.24■■□□□ 1.15
DhfrP00375 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
DhfrP00375 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DhfrP00375 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DhfrP00375 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DhfrP00375 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.2■■□□□ 1.14
DhfrP00375 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DhfrP00375 Gm24804-201ENSMUST00000174982 85 ntBASIC22.19■■□□□ 1.14
DhfrP00375 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DhfrP00375 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
DhfrP00375 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DhfrP00375 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DhfrP00375 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DhfrP00375 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
DhfrP00375 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.17■■□□□ 1.14
DhfrP00375 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
DhfrP00375 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DhfrP00375 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DhfrP00375 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
DhfrP00375 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DhfrP00375 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DhfrP00375 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
DhfrP00375 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DhfrP00375 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DhfrP00375 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
DhfrP00375 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.14■■□□□ 1.13
DhfrP00375 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
DhfrP00375 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
DhfrP00375 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
DhfrP00375 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
DhfrP00375 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.12■■□□□ 1.13
DhfrP00375 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DhfrP00375 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DhfrP00375 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DhfrP00375 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DhfrP00375 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DhfrP00375 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
DhfrP00375 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
DhfrP00375 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
DhfrP00375 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DhfrP00375 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DhfrP00375 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
DhfrP00375 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DhfrP00375 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.02■■□□□ 1.12
DhfrP00375 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
DhfrP00375 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DhfrP00375 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
DhfrP00375 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
DhfrP00375 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DhfrP00375 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.98■■□□□ 1.11
DhfrP00375 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DhfrP00375 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DhfrP00375 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DhfrP00375 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
DhfrP00375 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
DhfrP00375 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DhfrP00375 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DhfrP00375 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
DhfrP00375 Peli2-204ENSMUST00000226513 1320 ntBASIC21.94■■□□□ 1.1
DhfrP00375 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DhfrP00375 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.93■■□□□ 1.1
DhfrP00375 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
DhfrP00375 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DhfrP00375 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
DhfrP00375 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
DhfrP00375 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DhfrP00375 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DhfrP00375 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DhfrP00375 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms