Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ndufb11O09111 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.37■□□□□ 0.85
Ndufb11O09111 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ndufb11O09111 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ndufb11O09111 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ndufb11O09111 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ndufb11O09111 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Ndufb11O09111 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ndufb11O09111 Gm24109-201ENSMUST00000175489 103 ntBASIC20.32■□□□□ 0.84
Ndufb11O09111 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ndufb11O09111 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ndufb11O09111 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ndufb11O09111 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ndufb11O09111 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ndufb11O09111 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ndufb11O09111 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.28■□□□□ 0.84
Ndufb11O09111 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ndufb11O09111 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ndufb11O09111 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ndufb11O09111 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ndufb11O09111 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ndufb11O09111 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ndufb11O09111 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ndufb11O09111 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ndufb11O09111 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ndufb11O09111 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ndufb11O09111 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ndufb11O09111 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ndufb11O09111 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ndufb11O09111 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ndufb11O09111 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.18■□□□□ 0.82
Ndufb11O09111 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ndufb11O09111 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ndufb11O09111 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ndufb11O09111 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ndufb11O09111 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ndufb11O09111 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ndufb11O09111 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ndufb11O09111 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndufb11O09111 Gm23366-201ENSMUST00000175022 89 ntBASIC20.12■□□□□ 0.81
Ndufb11O09111 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndufb11O09111 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ndufb11O09111 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.1■□□□□ 0.81
Ndufb11O09111 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.1■□□□□ 0.81
Ndufb11O09111 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ndufb11O09111 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ndufb11O09111 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ndufb11O09111 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ndufb11O09111 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Ndufb11O09111 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ndufb11O09111 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ndufb11O09111 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.06■□□□□ 0.8
Ndufb11O09111 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ndufb11O09111 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ndufb11O09111 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ndufb11O09111 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ndufb11O09111 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ndufb11O09111 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ndufb11O09111 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ndufb11O09111 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ndufb11O09111 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ndufb11O09111 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ndufb11O09111 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ndufb11O09111 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ndufb11O09111 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ndufb11O09111 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ndufb11O09111 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ndufb11O09111 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndufb11O09111 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.98■□□□□ 0.79
Ndufb11O09111 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndufb11O09111 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ndufb11O09111 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.97■□□□□ 0.79
Ndufb11O09111 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ndufb11O09111 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ndufb11O09111 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ndufb11O09111 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
Ndufb11O09111 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ndufb11O09111 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ndufb11O09111 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ndufb11O09111 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ndufb11O09111 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ndufb11O09111 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ndufb11O09111 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ndufb11O09111 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ndufb11O09111 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndufb11O09111 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndufb11O09111 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndufb11O09111 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndufb11O09111 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndufb11O09111 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ndufb11O09111 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ndufb11O09111 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ndufb11O09111 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ndufb11O09111 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ndufb11O09111 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ndufb11O09111 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ndufb11O09111 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ndufb11O09111 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ndufb11O09111 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ndufb11O09111 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms