Protein–RNA interactions for Protein: J3QPE5

Gm5849, Predicted gene 5849, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5849J3QPE5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm5849J3QPE5 Amer2-203ENSMUST00000225247 2662 ntBASIC21■□□□□ 0.95
Gm5849J3QPE5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm5849J3QPE5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm5849J3QPE5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm5849J3QPE5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm5849J3QPE5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm5849J3QPE5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm5849J3QPE5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm5849J3QPE5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm5849J3QPE5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm5849J3QPE5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm5849J3QPE5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Gm5849J3QPE5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm5849J3QPE5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Gm5849J3QPE5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm5849J3QPE5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Gm5849J3QPE5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm5849J3QPE5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm5849J3QPE5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm5849J3QPE5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm5849J3QPE5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Gm5849J3QPE5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm5849J3QPE5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Gm5849J3QPE5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm5849J3QPE5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm5849J3QPE5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm5849J3QPE5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm5849J3QPE5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm5849J3QPE5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm5849J3QPE5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm5849J3QPE5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm5849J3QPE5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Gm5849J3QPE5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm5849J3QPE5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm5849J3QPE5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm5849J3QPE5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Gm5849J3QPE5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5849J3QPE5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5849J3QPE5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Gm5849J3QPE5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5849J3QPE5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Gm5849J3QPE5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5849J3QPE5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5849J3QPE5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5849J3QPE5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5849J3QPE5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Gm5849J3QPE5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5849J3QPE5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
Gm5849J3QPE5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Gm5849J3QPE5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5849J3QPE5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5849J3QPE5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Gm5849J3QPE5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5849J3QPE5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Gm5849J3QPE5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Gm5849J3QPE5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Gm5849J3QPE5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5849J3QPE5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5849J3QPE5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5849J3QPE5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5849J3QPE5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5849J3QPE5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Gm5849J3QPE5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Gm5849J3QPE5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm5849J3QPE5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm5849J3QPE5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm5849J3QPE5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5849J3QPE5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5849J3QPE5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5849J3QPE5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5849J3QPE5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5849J3QPE5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5849J3QPE5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5849J3QPE5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Gm5849J3QPE5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5849J3QPE5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5849J3QPE5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm5849J3QPE5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm5849J3QPE5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5849J3QPE5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.62■□□□□ 0.89
Gm5849J3QPE5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Gm5849J3QPE5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm5849J3QPE5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm5849J3QPE5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.61■□□□□ 0.89
Gm5849J3QPE5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm5849J3QPE5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm5849J3QPE5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm5849J3QPE5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Gm5849J3QPE5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm5849J3QPE5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm5849J3QPE5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm5849J3QPE5 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.57■□□□□ 0.88
Gm5849J3QPE5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Gm5849J3QPE5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5849J3QPE5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5849J3QPE5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5849J3QPE5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.56■□□□□ 0.88
Gm5849J3QPE5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5849J3QPE5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms