Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Zc3h13E9Q784 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Zc3h13E9Q784 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
Zc3h13E9Q784 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC36.83■■■■□ 3.49
Zc3h13E9Q784 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC36.82■■■■□ 3.49
Zc3h13E9Q784 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC36.82■■■■□ 3.48
Zc3h13E9Q784 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
Zc3h13E9Q784 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC36.81■■■■□ 3.48
Zc3h13E9Q784 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC36.81■■■■□ 3.48
Zc3h13E9Q784 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Zc3h13E9Q784 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
Zc3h13E9Q784 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
Zc3h13E9Q784 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC36.74■■■■□ 3.47
Zc3h13E9Q784 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
Zc3h13E9Q784 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
Zc3h13E9Q784 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
Zc3h13E9Q784 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Zc3h13E9Q784 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC36.68■■■■□ 3.46
Zc3h13E9Q784 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC36.64■■■■□ 3.46
Zc3h13E9Q784 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC36.62■■■■□ 3.45
Zc3h13E9Q784 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
Zc3h13E9Q784 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
Zc3h13E9Q784 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
Zc3h13E9Q784 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC36.57■■■■□ 3.45
Zc3h13E9Q784 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC36.56■■■■□ 3.44
Zc3h13E9Q784 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC36.56■■■■□ 3.44
Zc3h13E9Q784 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
Zc3h13E9Q784 Gm43863-201ENSMUST00000203822 1192 ntBASIC36.54■■■■□ 3.44
Zc3h13E9Q784 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
Zc3h13E9Q784 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
Zc3h13E9Q784 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC36.52■■■■□ 3.44
Zc3h13E9Q784 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC36.52■■■■□ 3.44
Zc3h13E9Q784 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
Zc3h13E9Q784 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
Zc3h13E9Q784 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC36.48■■■■□ 3.43
Zc3h13E9Q784 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Zc3h13E9Q784 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
Zc3h13E9Q784 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
Zc3h13E9Q784 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC36.44■■■■□ 3.42
Zc3h13E9Q784 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC36.44■■■■□ 3.42
Zc3h13E9Q784 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC36.43■■■■□ 3.42
Zc3h13E9Q784 AC157572.2-201ENSMUST00000226970 908 ntBASIC36.43■■■■□ 3.42
Zc3h13E9Q784 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC36.42■■■■□ 3.42
Zc3h13E9Q784 Gm42809-201ENSMUST00000198429 1138 ntBASIC36.41■■■■□ 3.42
Zc3h13E9Q784 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC36.39■■■■□ 3.42
Zc3h13E9Q784 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Zc3h13E9Q784 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
Zc3h13E9Q784 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
Zc3h13E9Q784 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC36.37■■■■□ 3.41
Zc3h13E9Q784 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC36.33■■■■□ 3.41
Zc3h13E9Q784 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC36.33■■■■□ 3.41
Zc3h13E9Q784 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Zc3h13E9Q784 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC36.31■■■■□ 3.4
Zc3h13E9Q784 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC36.31■■■■□ 3.4
Zc3h13E9Q784 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC36.3■■■■□ 3.4
Zc3h13E9Q784 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC36.29■■■■□ 3.4
Zc3h13E9Q784 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC36.28■■■■□ 3.4
Zc3h13E9Q784 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC36.28■■■■□ 3.4
Zc3h13E9Q784 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC36.24■■■■□ 3.39
Zc3h13E9Q784 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC36.24■■■■□ 3.39
Zc3h13E9Q784 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC36.24■■■■□ 3.39
Zc3h13E9Q784 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC36.24■■■■□ 3.39
Zc3h13E9Q784 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
Zc3h13E9Q784 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC36.21■■■■□ 3.39
Zc3h13E9Q784 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC36.2■■■■□ 3.38
Zc3h13E9Q784 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC36.19■■■■□ 3.38
Zc3h13E9Q784 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC36.19■■■■□ 3.38
Zc3h13E9Q784 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC36.18■■■■□ 3.38
Zc3h13E9Q784 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
Zc3h13E9Q784 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC36.17■■■■□ 3.38
Zc3h13E9Q784 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
Zc3h13E9Q784 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC36.15■■■■□ 3.38
Zc3h13E9Q784 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC36.15■■■■□ 3.38
Zc3h13E9Q784 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC36.14■■■■□ 3.38
Zc3h13E9Q784 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
Zc3h13E9Q784 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC36.14■■■■□ 3.38
Zc3h13E9Q784 Mir6538-201ENSMUST00000183713 110 ntBASIC36.14■■■■□ 3.38
Zc3h13E9Q784 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
Zc3h13E9Q784 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC36.12■■■■□ 3.37
Zc3h13E9Q784 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC36.11■■■■□ 3.37
Zc3h13E9Q784 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Zc3h13E9Q784 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
Zc3h13E9Q784 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Zc3h13E9Q784 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Zc3h13E9Q784 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC36.07■■■■□ 3.37
Zc3h13E9Q784 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
Zc3h13E9Q784 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
Zc3h13E9Q784 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC36.05■■■■□ 3.36
Zc3h13E9Q784 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Zc3h13E9Q784 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
Zc3h13E9Q784 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC36.01■■■■□ 3.36
Zc3h13E9Q784 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.35
Zc3h13E9Q784 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Zc3h13E9Q784 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Zc3h13E9Q784 Gm7432-201ENSMUST00000210343 879 ntBASIC35.99■■■■□ 3.35
Zc3h13E9Q784 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
Zc3h13E9Q784 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC35.97■■■■□ 3.35
Zc3h13E9Q784 Gm11175-201ENSMUST00000116172 543 ntBASIC35.96■■■■□ 3.35
Zc3h13E9Q784 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC35.94■■■■□ 3.34
Zc3h13E9Q784 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC35.94■■■■□ 3.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms