Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trav12d-1A0N8R0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav12d-1A0N8R0 Amer2-203ENSMUST00000225247 2662 ntBASIC20.32■□□□□ 0.84
Trav12d-1A0N8R0 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.32■□□□□ 0.84
Trav12d-1A0N8R0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trav12d-1A0N8R0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trav12d-1A0N8R0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trav12d-1A0N8R0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.3■□□□□ 0.84
Trav12d-1A0N8R0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav12d-1A0N8R0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav12d-1A0N8R0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav12d-1A0N8R0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav12d-1A0N8R0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav12d-1A0N8R0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav12d-1A0N8R0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav12d-1A0N8R0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trav12d-1A0N8R0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.29■□□□□ 0.84
Trav12d-1A0N8R0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav12d-1A0N8R0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav12d-1A0N8R0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav12d-1A0N8R0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Trav12d-1A0N8R0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Trav12d-1A0N8R0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.26■□□□□ 0.83
Trav12d-1A0N8R0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.26■□□□□ 0.83
Trav12d-1A0N8R0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav12d-1A0N8R0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav12d-1A0N8R0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
Trav12d-1A0N8R0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav12d-1A0N8R0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav12d-1A0N8R0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trav12d-1A0N8R0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trav12d-1A0N8R0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav12d-1A0N8R0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Trav12d-1A0N8R0 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.22■□□□□ 0.83
Trav12d-1A0N8R0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav12d-1A0N8R0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav12d-1A0N8R0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Trav12d-1A0N8R0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.2■□□□□ 0.82
Trav12d-1A0N8R0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav12d-1A0N8R0 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.18■□□□□ 0.82
Trav12d-1A0N8R0 Gm27322-201ENSMUST00000184007 104 ntBASIC20.18■□□□□ 0.82
Trav12d-1A0N8R0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
Trav12d-1A0N8R0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav12d-1A0N8R0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Trav12d-1A0N8R0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Trav12d-1A0N8R0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.16■□□□□ 0.82
Trav12d-1A0N8R0 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.16■□□□□ 0.82
Trav12d-1A0N8R0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav12d-1A0N8R0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav12d-1A0N8R0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.14■□□□□ 0.81
Trav12d-1A0N8R0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.14■□□□□ 0.81
Trav12d-1A0N8R0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.14■□□□□ 0.81
Trav12d-1A0N8R0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav12d-1A0N8R0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav12d-1A0N8R0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trav12d-1A0N8R0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trav12d-1A0N8R0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav12d-1A0N8R0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav12d-1A0N8R0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav12d-1A0N8R0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.11■□□□□ 0.81
Trav12d-1A0N8R0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav12d-1A0N8R0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav12d-1A0N8R0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav12d-1A0N8R0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav12d-1A0N8R0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav12d-1A0N8R0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav12d-1A0N8R0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trav12d-1A0N8R0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trav12d-1A0N8R0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav12d-1A0N8R0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.07■□□□□ 0.8
Trav12d-1A0N8R0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Trav12d-1A0N8R0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trav12d-1A0N8R0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav12d-1A0N8R0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav12d-1A0N8R0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav12d-1A0N8R0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav12d-1A0N8R0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav12d-1A0N8R0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav12d-1A0N8R0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav12d-1A0N8R0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav12d-1A0N8R0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav12d-1A0N8R0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav12d-1A0N8R0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav12d-1A0N8R0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav12d-1A0N8R0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trav12d-1A0N8R0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav12d-1A0N8R0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trav12d-1A0N8R0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav12d-1A0N8R0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.98■□□□□ 0.79
Trav12d-1A0N8R0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav12d-1A0N8R0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav12d-1A0N8R0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.95■□□□□ 0.78
Trav12d-1A0N8R0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Trav12d-1A0N8R0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav12d-1A0N8R0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav12d-1A0N8R0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trav12d-1A0N8R0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav12d-1A0N8R0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav12d-1A0N8R0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav12d-1A0N8R0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms