Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rpl9-ps6A0A140T8T4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rpl9-ps6A0A140T8T4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Rpl9-ps6A0A140T8T4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Rpl9-ps6A0A140T8T4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rpl9-ps6A0A140T8T4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Rpl9-ps6A0A140T8T4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Rpl9-ps6A0A140T8T4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpl9-ps6A0A140T8T4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpl9-ps6A0A140T8T4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Rpl9-ps6A0A140T8T4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpl9-ps6A0A140T8T4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rpl9-ps6A0A140T8T4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Rpl9-ps6A0A140T8T4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Rpl9-ps6A0A140T8T4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rpl9-ps6A0A140T8T4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rpl9-ps6A0A140T8T4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rpl9-ps6A0A140T8T4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rpl9-ps6A0A140T8T4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rpl9-ps6A0A140T8T4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rpl9-ps6A0A140T8T4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.24■■□□□ 1.79
Rpl9-ps6A0A140T8T4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rpl9-ps6A0A140T8T4 Gm9397-201ENSMUST00000200125 605 ntBASIC26.23■■□□□ 1.79
Rpl9-ps6A0A140T8T4 Gm45855-201ENSMUST00000212546 880 ntBASIC26.23■■□□□ 1.79
Rpl9-ps6A0A140T8T4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.22■■□□□ 1.79
Rpl9-ps6A0A140T8T4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rpl9-ps6A0A140T8T4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rpl9-ps6A0A140T8T4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rpl9-ps6A0A140T8T4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rpl9-ps6A0A140T8T4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.2■■□□□ 1.78
Rpl9-ps6A0A140T8T4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.19■■□□□ 1.78
Rpl9-ps6A0A140T8T4 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.17■■□□□ 1.78
Rpl9-ps6A0A140T8T4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Rpl9-ps6A0A140T8T4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rpl9-ps6A0A140T8T4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rpl9-ps6A0A140T8T4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rpl9-ps6A0A140T8T4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Rpl9-ps6A0A140T8T4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rpl9-ps6A0A140T8T4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rpl9-ps6A0A140T8T4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.11■■□□□ 1.77
Rpl9-ps6A0A140T8T4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rpl9-ps6A0A140T8T4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.77
Rpl9-ps6A0A140T8T4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rpl9-ps6A0A140T8T4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rpl9-ps6A0A140T8T4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rpl9-ps6A0A140T8T4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Rpl9-ps6A0A140T8T4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rpl9-ps6A0A140T8T4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.09■■□□□ 1.77
Rpl9-ps6A0A140T8T4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rpl9-ps6A0A140T8T4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.06■■□□□ 1.76
Rpl9-ps6A0A140T8T4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.06■■□□□ 1.76
Rpl9-ps6A0A140T8T4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rpl9-ps6A0A140T8T4 Gm24970-201ENSMUST00000175582 82 ntBASIC26.04■■□□□ 1.76
Rpl9-ps6A0A140T8T4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Rpl9-ps6A0A140T8T4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Rpl9-ps6A0A140T8T4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Rpl9-ps6A0A140T8T4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.02■■□□□ 1.76
Rpl9-ps6A0A140T8T4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
Rpl9-ps6A0A140T8T4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.02■■□□□ 1.76
Rpl9-ps6A0A140T8T4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Rpl9-ps6A0A140T8T4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.02■■□□□ 1.76
Rpl9-ps6A0A140T8T4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rpl9-ps6A0A140T8T4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rpl9-ps6A0A140T8T4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rpl9-ps6A0A140T8T4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rpl9-ps6A0A140T8T4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rpl9-ps6A0A140T8T4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
Rpl9-ps6A0A140T8T4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
Rpl9-ps6A0A140T8T4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Rpl9-ps6A0A140T8T4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Rpl9-ps6A0A140T8T4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rpl9-ps6A0A140T8T4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rpl9-ps6A0A140T8T4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.97■■□□□ 1.75
Rpl9-ps6A0A140T8T4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rpl9-ps6A0A140T8T4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.75
Rpl9-ps6A0A140T8T4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rpl9-ps6A0A140T8T4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.95■■□□□ 1.74
Rpl9-ps6A0A140T8T4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rpl9-ps6A0A140T8T4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rpl9-ps6A0A140T8T4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Rpl9-ps6A0A140T8T4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Rpl9-ps6A0A140T8T4 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.92■■□□□ 1.74
Rpl9-ps6A0A140T8T4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.91■■□□□ 1.74
Rpl9-ps6A0A140T8T4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rpl9-ps6A0A140T8T4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.9■■□□□ 1.74
Rpl9-ps6A0A140T8T4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.88■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rpl9-ps6A0A140T8T4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.85■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.84■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms