Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Igkv6-25A0A140T8N7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Igkv6-25A0A140T8N7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Igkv6-25A0A140T8N7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Igkv6-25A0A140T8N7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.39■■□□□ 1.49
Igkv6-25A0A140T8N7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Igkv6-25A0A140T8N7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Igkv6-25A0A140T8N7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Igkv6-25A0A140T8N7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.37■■□□□ 1.49
Igkv6-25A0A140T8N7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.37■■□□□ 1.49
Igkv6-25A0A140T8N7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
Igkv6-25A0A140T8N7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Igkv6-25A0A140T8N7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Igkv6-25A0A140T8N7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Igkv6-25A0A140T8N7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Igkv6-25A0A140T8N7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Igkv6-25A0A140T8N7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Igkv6-25A0A140T8N7 Gm24970-201ENSMUST00000175582 82 ntBASIC24.33■■□□□ 1.49
Igkv6-25A0A140T8N7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Igkv6-25A0A140T8N7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Igkv6-25A0A140T8N7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.31■■□□□ 1.48
Igkv6-25A0A140T8N7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Igkv6-25A0A140T8N7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.3■■□□□ 1.48
Igkv6-25A0A140T8N7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Igkv6-25A0A140T8N7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Igkv6-25A0A140T8N7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.3■■□□□ 1.48
Igkv6-25A0A140T8N7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Igkv6-25A0A140T8N7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Igkv6-25A0A140T8N7 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.29■■□□□ 1.48
Igkv6-25A0A140T8N7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Igkv6-25A0A140T8N7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Igkv6-25A0A140T8N7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Igkv6-25A0A140T8N7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Igkv6-25A0A140T8N7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Igkv6-25A0A140T8N7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
Igkv6-25A0A140T8N7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Igkv6-25A0A140T8N7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Igkv6-25A0A140T8N7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Igkv6-25A0A140T8N7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Igkv6-25A0A140T8N7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Igkv6-25A0A140T8N7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.21■■□□□ 1.47
Igkv6-25A0A140T8N7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.2■■□□□ 1.46
Igkv6-25A0A140T8N7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Igkv6-25A0A140T8N7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Igkv6-25A0A140T8N7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Igkv6-25A0A140T8N7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Igkv6-25A0A140T8N7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Igkv6-25A0A140T8N7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Igkv6-25A0A140T8N7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Igkv6-25A0A140T8N7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Igkv6-25A0A140T8N7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Igkv6-25A0A140T8N7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Igkv6-25A0A140T8N7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Igkv6-25A0A140T8N7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Igkv6-25A0A140T8N7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Igkv6-25A0A140T8N7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.12■■□□□ 1.45
Igkv6-25A0A140T8N7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Igkv6-25A0A140T8N7 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.11■■□□□ 1.45
Igkv6-25A0A140T8N7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Igkv6-25A0A140T8N7 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.1■■□□□ 1.45
Igkv6-25A0A140T8N7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Igkv6-25A0A140T8N7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Igkv6-25A0A140T8N7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
Igkv6-25A0A140T8N7 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.05■■□□□ 1.44
Igkv6-25A0A140T8N7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Igkv6-25A0A140T8N7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Igkv6-25A0A140T8N7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
Igkv6-25A0A140T8N7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.03■■□□□ 1.44
Igkv6-25A0A140T8N7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Igkv6-25A0A140T8N7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Igkv6-25A0A140T8N7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Igkv6-25A0A140T8N7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.99■■□□□ 1.43
Igkv6-25A0A140T8N7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Igkv6-25A0A140T8N7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Igkv6-25A0A140T8N7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Igkv6-25A0A140T8N7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Igkv6-25A0A140T8N7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Igkv6-25A0A140T8N7 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.95■■□□□ 1.42
Igkv6-25A0A140T8N7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Igkv6-25A0A140T8N7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.94■■□□□ 1.42
Igkv6-25A0A140T8N7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Igkv6-25A0A140T8N7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Igkv6-25A0A140T8N7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Igkv6-25A0A140T8N7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Igkv6-25A0A140T8N7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Igkv6-25A0A140T8N7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Igkv6-25A0A140T8N7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Igkv6-25A0A140T8N7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.91■■□□□ 1.42
Igkv6-25A0A140T8N7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Igkv6-25A0A140T8N7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Igkv6-25A0A140T8N7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Igkv6-25A0A140T8N7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Igkv6-25A0A140T8N7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
Igkv6-25A0A140T8N7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.87■■□□□ 1.41
Igkv6-25A0A140T8N7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Igkv6-25A0A140T8N7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Igkv6-25A0A140T8N7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Igkv6-25A0A140T8N7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Igkv6-25A0A140T8N7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Igkv6-25A0A140T8N7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms