Protein–RNA interactions for Protein: A0A0J9YUQ2

Gm42420, Predicted gene, 42420 (Fragment), mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42420A0A0J9YUQ2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.58■□□□□ 0.73
Gm42420A0A0J9YUQ2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm42420A0A0J9YUQ2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm42420A0A0J9YUQ2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm42420A0A0J9YUQ2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm42420A0A0J9YUQ2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm42420A0A0J9YUQ2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm42420A0A0J9YUQ2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm42420A0A0J9YUQ2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.54■□□□□ 0.72
Gm42420A0A0J9YUQ2 Amer2-203ENSMUST00000225247 2662 ntBASIC19.54■□□□□ 0.72
Gm42420A0A0J9YUQ2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm42420A0A0J9YUQ2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm42420A0A0J9YUQ2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm42420A0A0J9YUQ2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm42420A0A0J9YUQ2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm42420A0A0J9YUQ2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm42420A0A0J9YUQ2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm42420A0A0J9YUQ2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Gm42420A0A0J9YUQ2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm42420A0A0J9YUQ2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm42420A0A0J9YUQ2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm42420A0A0J9YUQ2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm42420A0A0J9YUQ2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm42420A0A0J9YUQ2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Gm42420A0A0J9YUQ2 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.46■□□□□ 0.71
Gm42420A0A0J9YUQ2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.46■□□□□ 0.71
Gm42420A0A0J9YUQ2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm42420A0A0J9YUQ2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Gm42420A0A0J9YUQ2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm42420A0A0J9YUQ2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm42420A0A0J9YUQ2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm42420A0A0J9YUQ2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm42420A0A0J9YUQ2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm42420A0A0J9YUQ2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm42420A0A0J9YUQ2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm42420A0A0J9YUQ2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm42420A0A0J9YUQ2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm42420A0A0J9YUQ2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm42420A0A0J9YUQ2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm42420A0A0J9YUQ2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm42420A0A0J9YUQ2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm42420A0A0J9YUQ2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm42420A0A0J9YUQ2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm42420A0A0J9YUQ2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm42420A0A0J9YUQ2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Gm42420A0A0J9YUQ2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm42420A0A0J9YUQ2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm42420A0A0J9YUQ2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm42420A0A0J9YUQ2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm42420A0A0J9YUQ2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm42420A0A0J9YUQ2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm42420A0A0J9YUQ2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm42420A0A0J9YUQ2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Gm42420A0A0J9YUQ2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Gm42420A0A0J9YUQ2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm42420A0A0J9YUQ2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm42420A0A0J9YUQ2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm42420A0A0J9YUQ2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm42420A0A0J9YUQ2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm42420A0A0J9YUQ2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm42420A0A0J9YUQ2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm42420A0A0J9YUQ2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm42420A0A0J9YUQ2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm42420A0A0J9YUQ2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
Gm42420A0A0J9YUQ2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm42420A0A0J9YUQ2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm42420A0A0J9YUQ2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm42420A0A0J9YUQ2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Gm42420A0A0J9YUQ2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Gm42420A0A0J9YUQ2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm42420A0A0J9YUQ2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Gm42420A0A0J9YUQ2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm42420A0A0J9YUQ2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm42420A0A0J9YUQ2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm42420A0A0J9YUQ2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm42420A0A0J9YUQ2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm42420A0A0J9YUQ2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm42420A0A0J9YUQ2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.2■□□□□ 0.66
Gm42420A0A0J9YUQ2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm42420A0A0J9YUQ2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Gm42420A0A0J9YUQ2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm42420A0A0J9YUQ2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Gm42420A0A0J9YUQ2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Gm42420A0A0J9YUQ2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm42420A0A0J9YUQ2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.18■□□□□ 0.66
Gm42420A0A0J9YUQ2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Gm42420A0A0J9YUQ2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm42420A0A0J9YUQ2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm42420A0A0J9YUQ2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm42420A0A0J9YUQ2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm42420A0A0J9YUQ2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm42420A0A0J9YUQ2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm42420A0A0J9YUQ2 Gm24109-201ENSMUST00000175489 103 ntBASIC19.16■□□□□ 0.66
Gm42420A0A0J9YUQ2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Gm42420A0A0J9YUQ2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm42420A0A0J9YUQ2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm42420A0A0J9YUQ2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm42420A0A0J9YUQ2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm42420A0A0J9YUQ2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm42420A0A0J9YUQ2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms