Protein–RNA interactions for Protein: A0A0G2JES9

Igkv4-54, Immunoglobulin kappa chain variable 4-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-54A0A0G2JES9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv4-54A0A0G2JES9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18■□□□□ 0.47
Igkv4-54A0A0G2JES9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Igkv4-54A0A0G2JES9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv4-54A0A0G2JES9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv4-54A0A0G2JES9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv4-54A0A0G2JES9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.97■□□□□ 0.47
Igkv4-54A0A0G2JES9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.97■□□□□ 0.47
Igkv4-54A0A0G2JES9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv4-54A0A0G2JES9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv4-54A0A0G2JES9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Igkv4-54A0A0G2JES9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv4-54A0A0G2JES9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv4-54A0A0G2JES9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Igkv4-54A0A0G2JES9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv4-54A0A0G2JES9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv4-54A0A0G2JES9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv4-54A0A0G2JES9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Igkv4-54A0A0G2JES9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv4-54A0A0G2JES9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Igkv4-54A0A0G2JES9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv4-54A0A0G2JES9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv4-54A0A0G2JES9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv4-54A0A0G2JES9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv4-54A0A0G2JES9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv4-54A0A0G2JES9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Igkv4-54A0A0G2JES9 Zfp131-205ENSMUST00000223812 663 ntBASIC17.89■□□□□ 0.45
Igkv4-54A0A0G2JES9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv4-54A0A0G2JES9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv4-54A0A0G2JES9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.87■□□□□ 0.45
Igkv4-54A0A0G2JES9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv4-54A0A0G2JES9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv4-54A0A0G2JES9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv4-54A0A0G2JES9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv4-54A0A0G2JES9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Igkv4-54A0A0G2JES9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Igkv4-54A0A0G2JES9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv4-54A0A0G2JES9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv4-54A0A0G2JES9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.85■□□□□ 0.45
Igkv4-54A0A0G2JES9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.84■□□□□ 0.45
Igkv4-54A0A0G2JES9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv4-54A0A0G2JES9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Igkv4-54A0A0G2JES9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Igkv4-54A0A0G2JES9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
Igkv4-54A0A0G2JES9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv4-54A0A0G2JES9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv4-54A0A0G2JES9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv4-54A0A0G2JES9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv4-54A0A0G2JES9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv4-54A0A0G2JES9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv4-54A0A0G2JES9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Igkv4-54A0A0G2JES9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.82■□□□□ 0.44
Igkv4-54A0A0G2JES9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.82■□□□□ 0.44
Igkv4-54A0A0G2JES9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv4-54A0A0G2JES9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv4-54A0A0G2JES9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Igkv4-54A0A0G2JES9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.79■□□□□ 0.44
Igkv4-54A0A0G2JES9 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.79■□□□□ 0.44
Igkv4-54A0A0G2JES9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv4-54A0A0G2JES9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv4-54A0A0G2JES9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv4-54A0A0G2JES9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv4-54A0A0G2JES9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv4-54A0A0G2JES9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Igkv4-54A0A0G2JES9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.76■□□□□ 0.43
Igkv4-54A0A0G2JES9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Igkv4-54A0A0G2JES9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv4-54A0A0G2JES9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv4-54A0A0G2JES9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv4-54A0A0G2JES9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv4-54A0A0G2JES9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv4-54A0A0G2JES9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.73■□□□□ 0.43
Igkv4-54A0A0G2JES9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv4-54A0A0G2JES9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv4-54A0A0G2JES9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Igkv4-54A0A0G2JES9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv4-54A0A0G2JES9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv4-54A0A0G2JES9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv4-54A0A0G2JES9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv4-54A0A0G2JES9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv4-54A0A0G2JES9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv4-54A0A0G2JES9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv4-54A0A0G2JES9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv4-54A0A0G2JES9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Igkv4-54A0A0G2JES9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv4-54A0A0G2JES9 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.67■□□□□ 0.42
Igkv4-54A0A0G2JES9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv4-54A0A0G2JES9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv4-54A0A0G2JES9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv4-54A0A0G2JES9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Igkv4-54A0A0G2JES9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv4-54A0A0G2JES9 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.64■□□□□ 0.41
Igkv4-54A0A0G2JES9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv4-54A0A0G2JES9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv4-54A0A0G2JES9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-54A0A0G2JES9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.63■□□□□ 0.41
Igkv4-54A0A0G2JES9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-54A0A0G2JES9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-54A0A0G2JES9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-54A0A0G2JES9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms