Protein–RNA interactions for Protein: A0A0G2JDU3

Igkv20-101-2, Immunoglobulin kappa chain variable 20-101-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv20-101-2A0A0G2JDU3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19,04■□□□□ 0,64
Igkv20-101-2A0A0G2JDU3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19,04■□□□□ 0,64
Igkv20-101-2A0A0G2JDU3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19,04■□□□□ 0,64
Igkv20-101-2A0A0G2JDU3 Peli2-204ENSMUST00000226513 1320 ntBASIC19,03■□□□□ 0,64
Igkv20-101-2A0A0G2JDU3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19,03■□□□□ 0,64
Igkv20-101-2A0A0G2JDU3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19,03■□□□□ 0,64
Igkv20-101-2A0A0G2JDU3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19,03■□□□□ 0,64
Igkv20-101-2A0A0G2JDU3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19,02■□□□□ 0,64
Igkv20-101-2A0A0G2JDU3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19,02■□□□□ 0,64
Igkv20-101-2A0A0G2JDU3 Gm9905-201ENSMUST00000065740 1845 ntBASIC19■□□□□ 0,63
Igkv20-101-2A0A0G2JDU3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18,99■□□□□ 0,63
Igkv20-101-2A0A0G2JDU3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18,99■□□□□ 0,63
Igkv20-101-2A0A0G2JDU3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18,98■□□□□ 0,63
Igkv20-101-2A0A0G2JDU3 Gm6206-201ENSMUST00000133472 2199 ntBASIC18,98■□□□□ 0,63
Igkv20-101-2A0A0G2JDU3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18,98■□□□□ 0,63
Igkv20-101-2A0A0G2JDU3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18,98■□□□□ 0,63
Igkv20-101-2A0A0G2JDU3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18,97■□□□□ 0,63
Igkv20-101-2A0A0G2JDU3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18,97■□□□□ 0,63
Igkv20-101-2A0A0G2JDU3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18,95■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18,95■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18,94■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18,94■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18,94■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18,93■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18,93■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18,93■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18,93■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18,92■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Gm6345-201ENSMUST00000180378 1691 ntBASIC18,92■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18,91■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Gm43445-201ENSMUST00000198564 2091 ntBASIC18,91■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18,91■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18,91■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18,9■□□□□ 0,62
Igkv20-101-2A0A0G2JDU3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18,89■□□□□ 0,61
Igkv20-101-2A0A0G2JDU3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18,88■□□□□ 0,61
Igkv20-101-2A0A0G2JDU3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18,87■□□□□ 0,61
Igkv20-101-2A0A0G2JDU3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18,86■□□□□ 0,61
Igkv20-101-2A0A0G2JDU3 Gm30346-201ENSMUST00000218641 1699 ntBASIC18,86■□□□□ 0,61
Igkv20-101-2A0A0G2JDU3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18,86■□□□□ 0,61
Igkv20-101-2A0A0G2JDU3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18,85■□□□□ 0,61
Igkv20-101-2A0A0G2JDU3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18,85■□□□□ 0,61
Igkv20-101-2A0A0G2JDU3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18,84■□□□□ 0,61
Igkv20-101-2A0A0G2JDU3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18,84■□□□□ 0,61
Igkv20-101-2A0A0G2JDU3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18,84■□□□□ 0,61
Igkv20-101-2A0A0G2JDU3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18,84■□□□□ 0,61
Igkv20-101-2A0A0G2JDU3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18,84■□□□□ 0,61
Igkv20-101-2A0A0G2JDU3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18,83■□□□□ 0,61
Igkv20-101-2A0A0G2JDU3 Gm24804-201ENSMUST00000174982 85 ntBASIC18,83■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18,83■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18,82■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18,82■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18,82■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18,81■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18,81■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18,81■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18,8■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18,8■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18,8■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18,8■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18,8■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18,79■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18,78■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18,78■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18,78■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18,78■□□□□ 0,6
Igkv20-101-2A0A0G2JDU3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18,76■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18,76■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18,76■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18,75■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18,75■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18,74■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18,74■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18,74■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18,73■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18,73■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18,73■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18,73■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18,72■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18,72■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18,72■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18,71■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18,71■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18,71■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18,71■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18,71■□□□□ 0,59
Igkv20-101-2A0A0G2JDU3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18,7■□□□□ 0,58
Igkv20-101-2A0A0G2JDU3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18,69■□□□□ 0,58
Igkv20-101-2A0A0G2JDU3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18,69■□□□□ 0,58
Igkv20-101-2A0A0G2JDU3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18,69■□□□□ 0,58
Igkv20-101-2A0A0G2JDU3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18,68■□□□□ 0,58
Igkv20-101-2A0A0G2JDU3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18,68■□□□□ 0,58
Igkv20-101-2A0A0G2JDU3 Gm16148-201ENSMUST00000119653 893 ntBASIC18,67■□□□□ 0,58
Igkv20-101-2A0A0G2JDU3 Amer2-203ENSMUST00000225247 2662 ntBASIC18,67■□□□□ 0,58
Igkv20-101-2A0A0G2JDU3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18,66■□□□□ 0,58
Igkv20-101-2A0A0G2JDU3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18,65■□□□□ 0,58
Igkv20-101-2A0A0G2JDU3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18,65■□□□□ 0,58
Igkv20-101-2A0A0G2JDU3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18,64■□□□□ 0,57
Igkv20-101-2A0A0G2JDU3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18,63■□□□□ 0,57
Igkv20-101-2A0A0G2JDU3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18,63■□□□□ 0,57
Retrieved 100 of 76,532 protein–RNA pairs in 10,6 ms