Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tcrg-V4A0A0B4J1J8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Tcrg-V4A0A0B4J1J8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcrg-V4A0A0B4J1J8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcrg-V4A0A0B4J1J8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcrg-V4A0A0B4J1J8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tcrg-V4A0A0B4J1J8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tcrg-V4A0A0B4J1J8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Tcrg-V4A0A0B4J1J8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcrg-V4A0A0B4J1J8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcrg-V4A0A0B4J1J8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcrg-V4A0A0B4J1J8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tcrg-V4A0A0B4J1J8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tcrg-V4A0A0B4J1J8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tcrg-V4A0A0B4J1J8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.83■□□□□ 0.61
Tcrg-V4A0A0B4J1J8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Tcrg-V4A0A0B4J1J8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcrg-V4A0A0B4J1J8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Tcrg-V4A0A0B4J1J8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcrg-V4A0A0B4J1J8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.81■□□□□ 0.6
Tcrg-V4A0A0B4J1J8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcrg-V4A0A0B4J1J8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Tcrg-V4A0A0B4J1J8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcrg-V4A0A0B4J1J8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcrg-V4A0A0B4J1J8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcrg-V4A0A0B4J1J8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tcrg-V4A0A0B4J1J8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcrg-V4A0A0B4J1J8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcrg-V4A0A0B4J1J8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcrg-V4A0A0B4J1J8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tcrg-V4A0A0B4J1J8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.74■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tcrg-V4A0A0B4J1J8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tcrg-V4A0A0B4J1J8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tcrg-V4A0A0B4J1J8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.69■□□□□ 0.58
Tcrg-V4A0A0B4J1J8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tcrg-V4A0A0B4J1J8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcrg-V4A0A0B4J1J8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tcrg-V4A0A0B4J1J8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tcrg-V4A0A0B4J1J8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tcrg-V4A0A0B4J1J8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tcrg-V4A0A0B4J1J8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tcrg-V4A0A0B4J1J8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tcrg-V4A0A0B4J1J8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tcrg-V4A0A0B4J1J8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.66■□□□□ 0.58
Tcrg-V4A0A0B4J1J8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tcrg-V4A0A0B4J1J8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tcrg-V4A0A0B4J1J8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tcrg-V4A0A0B4J1J8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tcrg-V4A0A0B4J1J8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tcrg-V4A0A0B4J1J8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tcrg-V4A0A0B4J1J8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Tcrg-V4A0A0B4J1J8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcrg-V4A0A0B4J1J8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcrg-V4A0A0B4J1J8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcrg-V4A0A0B4J1J8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tcrg-V4A0A0B4J1J8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcrg-V4A0A0B4J1J8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcrg-V4A0A0B4J1J8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Tcrg-V4A0A0B4J1J8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Tcrg-V4A0A0B4J1J8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tcrg-V4A0A0B4J1J8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Tcrg-V4A0A0B4J1J8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.54■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tcrg-V4A0A0B4J1J8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tcrg-V4A0A0B4J1J8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Tcrg-V4A0A0B4J1J8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms