Protein–RNA interactions for Protein: A0A0A6YXT2

Ighv1-36, Immunoglobulin heavy variable 1-36 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-36A0A0A6YXT2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Ighv1-36A0A0A6YXT2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Ighv1-36A0A0A6YXT2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.6■□□□□ 0.89
Ighv1-36A0A0A6YXT2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.59■□□□□ 0.89
Ighv1-36A0A0A6YXT2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ighv1-36A0A0A6YXT2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ighv1-36A0A0A6YXT2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv1-36A0A0A6YXT2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Ighv1-36A0A0A6YXT2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-36A0A0A6YXT2 Gm26115-201ENSMUST00000175605 87 ntBASIC20.54■□□□□ 0.88
Ighv1-36A0A0A6YXT2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-36A0A0A6YXT2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv1-36A0A0A6YXT2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv1-36A0A0A6YXT2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv1-36A0A0A6YXT2 Gm8109-201ENSMUST00000194076 746 ntBASIC20.53■□□□□ 0.88
Ighv1-36A0A0A6YXT2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv1-36A0A0A6YXT2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ighv1-36A0A0A6YXT2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv1-36A0A0A6YXT2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv1-36A0A0A6YXT2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ighv1-36A0A0A6YXT2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-36A0A0A6YXT2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ighv1-36A0A0A6YXT2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-36A0A0A6YXT2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-36A0A0A6YXT2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-36A0A0A6YXT2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.51■□□□□ 0.87
Ighv1-36A0A0A6YXT2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv1-36A0A0A6YXT2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
Ighv1-36A0A0A6YXT2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv1-36A0A0A6YXT2 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.48■□□□□ 0.87
Ighv1-36A0A0A6YXT2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv1-36A0A0A6YXT2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv1-36A0A0A6YXT2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Ighv1-36A0A0A6YXT2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ighv1-36A0A0A6YXT2 Peli2-204ENSMUST00000226513 1320 ntBASIC20.46■□□□□ 0.87
Ighv1-36A0A0A6YXT2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ighv1-36A0A0A6YXT2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ighv1-36A0A0A6YXT2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ighv1-36A0A0A6YXT2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ighv1-36A0A0A6YXT2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ighv1-36A0A0A6YXT2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Ighv1-36A0A0A6YXT2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ighv1-36A0A0A6YXT2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ighv1-36A0A0A6YXT2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ighv1-36A0A0A6YXT2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ighv1-36A0A0A6YXT2 Amer2-203ENSMUST00000225247 2662 ntBASIC20.4■□□□□ 0.86
Ighv1-36A0A0A6YXT2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ighv1-36A0A0A6YXT2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ighv1-36A0A0A6YXT2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ighv1-36A0A0A6YXT2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ighv1-36A0A0A6YXT2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv1-36A0A0A6YXT2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ighv1-36A0A0A6YXT2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv1-36A0A0A6YXT2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ighv1-36A0A0A6YXT2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.35■□□□□ 0.85
Ighv1-36A0A0A6YXT2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv1-36A0A0A6YXT2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.34■□□□□ 0.85
Ighv1-36A0A0A6YXT2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.34■□□□□ 0.85
Ighv1-36A0A0A6YXT2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv1-36A0A0A6YXT2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv1-36A0A0A6YXT2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv1-36A0A0A6YXT2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Ighv1-36A0A0A6YXT2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ighv1-36A0A0A6YXT2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ighv1-36A0A0A6YXT2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ighv1-36A0A0A6YXT2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ighv1-36A0A0A6YXT2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ighv1-36A0A0A6YXT2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ighv1-36A0A0A6YXT2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ighv1-36A0A0A6YXT2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-36A0A0A6YXT2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-36A0A0A6YXT2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ighv1-36A0A0A6YXT2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ighv1-36A0A0A6YXT2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.29■□□□□ 0.84
Ighv1-36A0A0A6YXT2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Ighv1-36A0A0A6YXT2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-36A0A0A6YXT2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-36A0A0A6YXT2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv1-36A0A0A6YXT2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv1-36A0A0A6YXT2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv1-36A0A0A6YXT2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.25■□□□□ 0.83
Ighv1-36A0A0A6YXT2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ighv1-36A0A0A6YXT2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ighv1-36A0A0A6YXT2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.24■□□□□ 0.83
Ighv1-36A0A0A6YXT2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ighv1-36A0A0A6YXT2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ighv1-36A0A0A6YXT2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ighv1-36A0A0A6YXT2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ighv1-36A0A0A6YXT2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ighv1-36A0A0A6YXT2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ighv1-36A0A0A6YXT2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ighv1-36A0A0A6YXT2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.2■□□□□ 0.82
Ighv1-36A0A0A6YXT2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ighv1-36A0A0A6YXT2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-36A0A0A6YXT2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-36A0A0A6YXT2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-36A0A0A6YXT2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-36A0A0A6YXT2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ighv1-36A0A0A6YXT2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ighv1-36A0A0A6YXT2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms