Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-11A0A0A6YWI9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-11A0A0A6YWI9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-11A0A0A6YWI9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-11A0A0A6YWI9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-11A0A0A6YWI9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-11A0A0A6YWI9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-11A0A0A6YWI9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-11A0A0A6YWI9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-11A0A0A6YWI9 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.71■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Gm8109-201ENSMUST00000194076 746 ntBASIC17.7■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ighv1-11A0A0A6YWI9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ighv1-11A0A0A6YWI9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-11A0A0A6YWI9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-11A0A0A6YWI9 Amer2-203ENSMUST00000225247 2662 ntBASIC17.62■□□□□ 0.41
Ighv1-11A0A0A6YWI9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-11A0A0A6YWI9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-11A0A0A6YWI9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-11A0A0A6YWI9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ighv1-11A0A0A6YWI9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-11A0A0A6YWI9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-11A0A0A6YWI9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ighv1-11A0A0A6YWI9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-11A0A0A6YWI9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.59■□□□□ 0.41
Ighv1-11A0A0A6YWI9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-11A0A0A6YWI9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-11A0A0A6YWI9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-11A0A0A6YWI9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.57■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ighv1-11A0A0A6YWI9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.5■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.5■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.49■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.48■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.48■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-11A0A0A6YWI9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.48■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-11A0A0A6YWI9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.42■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Peli2-204ENSMUST00000226513 1320 ntBASIC17.42■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.42■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.4■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ighv1-11A0A0A6YWI9 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.39■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-11A0A0A6YWI9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms